Protein–RNA interactions for Protein: O00358

FOXE1, Forkhead box protein E1, humanhuman

Predicted RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXE1O00358 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
FOXE1O00358 FO538757.1-201ENST00000623083 1397 ntBASIC15.11■□□□□ 0.01
FOXE1O00358 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.11■□□□□ 0.01
FOXE1O00358 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXE1O00358 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXE1O00358 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
FOXE1O00358 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXE1O00358 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXE1O00358 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FOXE1O00358 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
FOXE1O00358 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXE1O00358 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXE1O00358 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXE1O00358 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FOXE1O00358 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.1■□□□□ 0.01
FOXE1O00358 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.1■□□□□ 0.01
FOXE1O00358 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXE1O00358 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.1■□□□□ 0.01
FOXE1O00358 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXE1O00358 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.1■□□□□ 0.01
FOXE1O00358 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FOXE1O00358 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXE1O00358 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXE1O00358 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXE1O00358 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
FOXE1O00358 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.1■□□□□ 0.01
FOXE1O00358 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXE1O00358 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
FOXE1O00358 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
FOXE1O00358 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
FOXE1O00358 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FOXE1O00358 RPL37AP1-201ENST00000412502 279 ntBASIC15.1■□□□□ 0.01
FOXE1O00358 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.1■□□□□ 0.01
FOXE1O00358 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FOXE1O00358 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXE1O00358 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.1■□□□□ 0.01
FOXE1O00358 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXE1O00358 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.1■□□□□ 0.01
FOXE1O00358 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXE1O00358 Z92544.3-201ENST00000624747 417 ntBASIC15.1■□□□□ 0.01
FOXE1O00358 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.1■□□□□ 0.01
FOXE1O00358 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXE1O00358 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
FOXE1O00358 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXE1O00358 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.1■□□□□ 0.01
FOXE1O00358 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXE1O00358 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXE1O00358 TUBB3P1-201ENST00000405796 1332 ntBASIC15.1■□□□□ 0.01
FOXE1O00358 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXE1O00358 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
FOXE1O00358 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXE1O00358 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FOXE1O00358 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXE1O00358 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXE1O00358 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXE1O00358 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FOXE1O00358 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXE1O00358 Z97205.2-201ENST00000564697 1639 ntBASIC15.1■□□□□ 0.01
FOXE1O00358 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXE1O00358 AC006486.2-201ENST00000624246 2199 ntBASIC15.09■□□□□ 0.01
FOXE1O00358 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
FOXE1O00358 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXE1O00358 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXE1O00358 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FOXE1O00358 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXE1O00358 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXE1O00358 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXE1O00358 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.09■□□□□ 0.01
FOXE1O00358 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXE1O00358 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.09■□□□□ 0.01
FOXE1O00358 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.09■□□□□ 0.01
FOXE1O00358 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.09■□□□□ 0.01
FOXE1O00358 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXE1O00358 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FOXE1O00358 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
FOXE1O00358 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXE1O00358 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXE1O00358 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
FOXE1O00358 AC023157.3-201ENST00000619086 2088 ntBASIC15.09■□□□□ 0.01
FOXE1O00358 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.09■□□□□ 0.01
FOXE1O00358 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXE1O00358 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FOXE1O00358 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXE1O00358 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXE1O00358 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXE1O00358 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.09■□□□□ 0.01
FOXE1O00358 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.09■□□□□ 0.01
FOXE1O00358 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
FOXE1O00358 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
FOXE1O00358 AP001160.2-201ENST00000596071 487 ntBASIC15.09■□□□□ 0.01
FOXE1O00358 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.09■□□□□ 0.01
FOXE1O00358 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXE1O00358 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXE1O00358 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXE1O00358 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXE1O00358 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FOXE1O00358 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXE1O00358 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXE1O00358 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXE1O00358 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms