Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.06■□□□□ 0
UPK1AO00322 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1AO00322 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.06■□□□□ 0
UPK1AO00322 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1AO00322 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
UPK1AO00322 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
UPK1AO00322 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
UPK1AO00322 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.05■□□□□ 0
UPK1AO00322 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
UPK1AO00322 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
UPK1AO00322 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.05■□□□□ 0
UPK1AO00322 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
UPK1AO00322 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.05■□□□□ 0
UPK1AO00322 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
UPK1AO00322 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
UPK1AO00322 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.05■□□□□ 0
UPK1AO00322 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.05■□□□□ 0
UPK1AO00322 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
UPK1AO00322 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
UPK1AO00322 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
UPK1AO00322 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.05■□□□□ -0
UPK1AO00322 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.05■□□□□ -0
UPK1AO00322 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.05■□□□□ -0
UPK1AO00322 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
UPK1AO00322 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.05■□□□□ -0
UPK1AO00322 AC211486.1-202ENST00000416371 468 ntBASIC15.05■□□□□ -0
UPK1AO00322 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.05■□□□□ -0
UPK1AO00322 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.05■□□□□ -0
UPK1AO00322 AC211476.1-201ENST00000503899 468 ntBASIC15.05■□□□□ -0
UPK1AO00322 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.05■□□□□ -0
UPK1AO00322 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.05■□□□□ -0
UPK1AO00322 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.05■□□□□ -0
UPK1AO00322 RARRES2P9-201ENST00000565168 469 ntBASIC15.05■□□□□ -0
UPK1AO00322 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.05■□□□□ -0
UPK1AO00322 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.05■□□□□ -0
UPK1AO00322 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.05■□□□□ -0
UPK1AO00322 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.05■□□□□ -0
UPK1AO00322 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
UPK1AO00322 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.05■□□□□ -0
UPK1AO00322 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.05■□□□□ -0
UPK1AO00322 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.05■□□□□ -0
UPK1AO00322 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UPK1AO00322 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UPK1AO00322 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
UPK1AO00322 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.05■□□□□ -0
UPK1AO00322 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.05■□□□□ -0
UPK1AO00322 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
UPK1AO00322 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.05■□□□□ -0
UPK1AO00322 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UPK1AO00322 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.05■□□□□ -0
UPK1AO00322 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.05■□□□□ -0
UPK1AO00322 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.05■□□□□ -0
UPK1AO00322 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.05■□□□□ -0
UPK1AO00322 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.05■□□□□ -0
UPK1AO00322 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UPK1AO00322 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
UPK1AO00322 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UPK1AO00322 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.05■□□□□ -0
UPK1AO00322 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
UPK1AO00322 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
UPK1AO00322 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
UPK1AO00322 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.04■□□□□ -0
UPK1AO00322 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UPK1AO00322 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
UPK1AO00322 AC092127.1-201ENST00000567093 3455 ntBASIC15.04■□□□□ -0
UPK1AO00322 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
UPK1AO00322 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UPK1AO00322 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.04■□□□□ -0
UPK1AO00322 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.04■□□□□ -0
UPK1AO00322 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
UPK1AO00322 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
UPK1AO00322 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.04■□□□□ -0
UPK1AO00322 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UPK1AO00322 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
UPK1AO00322 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.04■□□□□ -0
UPK1AO00322 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
UPK1AO00322 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.04■□□□□ -0
UPK1AO00322 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.04■□□□□ -0
UPK1AO00322 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
UPK1AO00322 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
UPK1AO00322 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.04■□□□□ -0
UPK1AO00322 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
UPK1AO00322 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
UPK1AO00322 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
UPK1AO00322 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UPK1AO00322 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.04■□□□□ -0
UPK1AO00322 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.04■□□□□ -0
UPK1AO00322 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.04■□□□□ -0
UPK1AO00322 KRT18P32-201ENST00000424695 1287 ntBASIC15.04■□□□□ -0
UPK1AO00322 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.04■□□□□ -0
UPK1AO00322 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.04■□□□□ -0
UPK1AO00322 AC243562.2-201ENST00000561247 970 ntBASIC15.04■□□□□ -0
UPK1AO00322 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.04■□□□□ -0
UPK1AO00322 AC004835.2-201ENST00000603762 682 ntBASIC15.04■□□□□ -0
UPK1AO00322 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.04■□□□□ -0
UPK1AO00322 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UPK1AO00322 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.04■□□□□ -0
UPK1AO00322 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
UPK1AO00322 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
UPK1AO00322 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms