Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 CYP2A7P1-201ENST00000595391 815 ntBASIC15.21■□□□□ 0.03
PDLIM1O00151 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PDLIM1O00151 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.21■□□□□ 0.03
PDLIM1O00151 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.21■□□□□ 0.03
PDLIM1O00151 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.21■□□□□ 0.03
PDLIM1O00151 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDLIM1O00151 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDLIM1O00151 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDLIM1O00151 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PDLIM1O00151 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDLIM1O00151 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDLIM1O00151 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDLIM1O00151 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.21■□□□□ 0.03
PDLIM1O00151 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PDLIM1O00151 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PDLIM1O00151 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
PDLIM1O00151 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PDLIM1O00151 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PDLIM1O00151 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PDLIM1O00151 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PDLIM1O00151 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
PDLIM1O00151 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PDLIM1O00151 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.21■□□□□ 0.02
PDLIM1O00151 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
PDLIM1O00151 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.21■□□□□ 0.02
PDLIM1O00151 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PDLIM1O00151 AP002414.3-201ENST00000589352 1468 ntBASIC15.2■□□□□ 0.02
PDLIM1O00151 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.2■□□□□ 0.02
PDLIM1O00151 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM1O00151 IL9RP2-201ENST00000423948 1312 ntBASIC15.2■□□□□ 0.02
PDLIM1O00151 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM1O00151 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM1O00151 AC006504.4-201ENST00000592118 1568 ntBASIC15.2■□□□□ 0.02
PDLIM1O00151 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
PDLIM1O00151 AC027601.5-201ENST00000624065 2482 ntBASIC15.2■□□□□ 0.02
PDLIM1O00151 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PDLIM1O00151 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.2■□□□□ 0.02
PDLIM1O00151 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.2■□□□□ 0.02
PDLIM1O00151 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.2■□□□□ 0.02
PDLIM1O00151 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.2■□□□□ 0.02
PDLIM1O00151 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM1O00151 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM1O00151 SLC22A20-204ENST00000530038 1673 ntBASIC15.2■□□□□ 0.02
PDLIM1O00151 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
PDLIM1O00151 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.2■□□□□ 0.02
PDLIM1O00151 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM1O00151 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM1O00151 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM1O00151 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.2■□□□□ 0.02
PDLIM1O00151 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.2■□□□□ 0.02
PDLIM1O00151 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.2■□□□□ 0.02
PDLIM1O00151 ELK2BP-201ENST00000415014 1224 ntBASIC15.2■□□□□ 0.02
PDLIM1O00151 PMS2P1-201ENST00000431037 1228 ntBASIC15.2■□□□□ 0.02
PDLIM1O00151 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.2■□□□□ 0.02
PDLIM1O00151 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM1O00151 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.2■□□□□ 0.02
PDLIM1O00151 AC079776.4-201ENST00000511039 504 ntBASIC15.2■□□□□ 0.02
PDLIM1O00151 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM1O00151 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.2■□□□□ 0.02
PDLIM1O00151 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.2■□□□□ 0.02
PDLIM1O00151 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.2■□□□□ 0.02
PDLIM1O00151 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.2■□□□□ 0.02
PDLIM1O00151 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
PDLIM1O00151 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
PDLIM1O00151 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.2■□□□□ 0.02
PDLIM1O00151 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC15.2■□□□□ 0.02
PDLIM1O00151 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM1O00151 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM1O00151 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.2■□□□□ 0.02
PDLIM1O00151 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM1O00151 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM1O00151 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM1O00151 AC126755.1-201ENST00000525846 6405 ntBASIC15.2■□□□□ 0.02
PDLIM1O00151 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.2■□□□□ 0.02
PDLIM1O00151 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PDLIM1O00151 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM1O00151 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC15.2■□□□□ 0.02
PDLIM1O00151 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM1O00151 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.2■□□□□ 0.02
PDLIM1O00151 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM1O00151 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PDLIM1O00151 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM1O00151 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
PDLIM1O00151 MBLAC2-202ENST00000514906 1936 ntBASIC15.19■□□□□ 0.02
PDLIM1O00151 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.19■□□□□ 0.02
PDLIM1O00151 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PDLIM1O00151 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDLIM1O00151 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PDLIM1O00151 CICP17-201ENST00000418553 2377 ntBASIC15.19■□□□□ 0.02
PDLIM1O00151 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
PDLIM1O00151 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
PDLIM1O00151 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PDLIM1O00151 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.19■□□□□ 0.02
PDLIM1O00151 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDLIM1O00151 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PDLIM1O00151 SLC9A3P3-201ENST00000457608 2229 ntBASIC15.19■□□□□ 0.02
PDLIM1O00151 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.19■□□□□ 0.02
PDLIM1O00151 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PDLIM1O00151 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDLIM1O00151 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms