Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.83■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.83■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.83■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.83■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 BRI3BPP1-201ENST00000594224 787 ntBASIC15.83■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.83■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.83■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.83■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.83■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 AC134915.1-201ENST00000426461 574 ntBASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 U91328.1-201ENST00000437528 223 ntBASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 AC015936.2-201ENST00000593177 259 ntBASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 AL049840.4-201ENST00000602422 811 ntBASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 KRT8P22-201ENST00000562317 1415 ntBASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 AC124067.4-201ENST00000519691 2379 ntBASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.82■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.81■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.81■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 AL121723.1-201ENST00000445194 1519 ntBASIC15.81■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.81■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.81■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.81■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.81■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.81■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.81■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 AC000095.1-201ENST00000603208 874 ntBASIC15.81■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 AC006449.5-201ENST00000610658 2098 ntBASIC15.81■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 INTS4P2-202ENST00000614726 2019 ntBASIC15.81■□□□□ 0.12
C1QTNF3-AMACRE9PGA6 CU634019.7-201ENST00000624153 1185 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms