Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 AC234783.1-201ENST00000441761 496 ntBASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 TIMM17BP1-201ENST00000545713 516 ntBASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 AC015936.2-201ENST00000593177 259 ntBASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 AL512343.1-201ENST00000605837 169 ntBASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHGA9Q9Y5G4 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGA9Q9Y5G4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGA9Q9Y5G4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGA9Q9Y5G4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGA9Q9Y5G4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGA9Q9Y5G4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
PCDHGA9Q9Y5G4 ALOX12P2-203ENST00000570921 1945 ntBASIC14.86□□□□□ -0.03
PCDHGA9Q9Y5G4 MTHFR-217ENST00000641820 1569 ntBASIC14.86□□□□□ -0.03
PCDHGA9Q9Y5G4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
PCDHGA9Q9Y5G4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGA9Q9Y5G4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
PCDHGA9Q9Y5G4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGA9Q9Y5G4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGA9Q9Y5G4 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGA9Q9Y5G4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
PCDHGA9Q9Y5G4 BOLA2P3-201ENST00000404566 256 ntBASIC14.86□□□□□ -0.03
PCDHGA9Q9Y5G4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.86□□□□□ -0.03
PCDHGA9Q9Y5G4 AL589987.1-201ENST00000453380 819 ntBASIC14.86□□□□□ -0.03
PCDHGA9Q9Y5G4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGA9Q9Y5G4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
PCDHGA9Q9Y5G4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.86□□□□□ -0.03
PCDHGA9Q9Y5G4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
PCDHGA9Q9Y5G4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.86□□□□□ -0.03
PCDHGA9Q9Y5G4 AL365330.1-201ENST00000607459 531 ntBASIC14.86□□□□□ -0.03
PCDHGA9Q9Y5G4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGA9Q9Y5G4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.86□□□□□ -0.03
PCDHGA9Q9Y5G4 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
PCDHGA9Q9Y5G4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGA9Q9Y5G4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGA9Q9Y5G4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 AL645728.1-201ENST00000366221 2101 ntBASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms