Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 AL136982.4-201ENST00000437689 1740 ntBASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 AC105917.1-201ENST00000506637 2539 ntBASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHB1Q9Y5F3 CYP4F24P-201ENST00000586049 1580 ntBASIC15.87■□□□□ 0.13
PCDHB1Q9Y5F3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHB1Q9Y5F3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHB1Q9Y5F3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHB1Q9Y5F3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHB1Q9Y5F3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHB1Q9Y5F3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PCDHB1Q9Y5F3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHB1Q9Y5F3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHB1Q9Y5F3 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHB1Q9Y5F3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHB1Q9Y5F3 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
PCDHB1Q9Y5F3 MTND6P24-201ENST00000440466 518 ntBASIC15.87■□□□□ 0.13
PCDHB1Q9Y5F3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDHB1Q9Y5F3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHB1Q9Y5F3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHB1Q9Y5F3 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDHB1Q9Y5F3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDHB1Q9Y5F3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDHB1Q9Y5F3 TEX28P1-201ENST00000613479 1221 ntBASIC15.87■□□□□ 0.13
PCDHB1Q9Y5F3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHB1Q9Y5F3 TEX28P2-201ENST00000617764 1221 ntBASIC15.87■□□□□ 0.13
PCDHB1Q9Y5F3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PCDHB1Q9Y5F3 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHB1Q9Y5F3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHB1Q9Y5F3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHB1Q9Y5F3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHB1Q9Y5F3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHB1Q9Y5F3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
PCDHB1Q9Y5F3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHB1Q9Y5F3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHB1Q9Y5F3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHB1Q9Y5F3 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 EEF1DP4-201ENST00000446006 880 ntBASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 IGHV3-71-201ENST00000523324 359 ntBASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 AL844908.2-201ENST00000609461 460 ntBASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 REXO1L1P-202ENST00000608646 1974 ntBASIC15.86■□□□□ 0.13
PCDHB1Q9Y5F3 KRT8P37-201ENST00000451609 1420 ntBASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 AC138969.3-201ENST00000546612 1459 ntBASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 AC138932.2-201ENST00000548268 1459 ntBASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 AC126755.4-201ENST00000549796 1459 ntBASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms