Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 KRT89P-201ENST00000620027 1478 ntBASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 CHCHD2P8-201ENST00000429873 447 ntBASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 HCG4P8-203ENST00000443049 980 ntBASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 AP002414.4-201ENST00000589764 1148 ntBASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBQLN2Q9UHD9 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 GUSBP12-201ENST00000513727 720 ntBASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBQLN2Q9UHD9 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms