Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.58□□□□□ -0.08
LRFN1Q9P244 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.58□□□□□ -0.08
LRFN1Q9P244 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.58□□□□□ -0.08
LRFN1Q9P244 REXO1L1P-202ENST00000608646 1974 ntBASIC14.58□□□□□ -0.08
LRFN1Q9P244 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRFN1Q9P244 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.58□□□□□ -0.08
LRFN1Q9P244 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRFN1Q9P244 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.58□□□□□ -0.08
LRFN1Q9P244 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRFN1Q9P244 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LRFN1Q9P244 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
LRFN1Q9P244 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.58□□□□□ -0.08
LRFN1Q9P244 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LRFN1Q9P244 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.58□□□□□ -0.08
LRFN1Q9P244 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRFN1Q9P244 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LRFN1Q9P244 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
LRFN1Q9P244 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRFN1Q9P244 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRFN1Q9P244 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRFN1Q9P244 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.57□□□□□ -0.08
LRFN1Q9P244 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRFN1Q9P244 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRFN1Q9P244 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
LRFN1Q9P244 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRFN1Q9P244 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.57□□□□□ -0.08
LRFN1Q9P244 TARDBPP1-201ENST00000442013 1203 ntBASIC14.57□□□□□ -0.08
LRFN1Q9P244 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRFN1Q9P244 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.57□□□□□ -0.08
LRFN1Q9P244 INE1-201ENST00000456273 945 ntBASIC14.57□□□□□ -0.08
LRFN1Q9P244 PHKG1P2-201ENST00000457537 863 ntBASIC14.57□□□□□ -0.08
LRFN1Q9P244 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LRFN1Q9P244 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.57□□□□□ -0.08
LRFN1Q9P244 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.57□□□□□ -0.08
LRFN1Q9P244 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.57□□□□□ -0.08
LRFN1Q9P244 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.57□□□□□ -0.08
LRFN1Q9P244 AL450472.2-201ENST00000603663 1156 ntBASIC14.57□□□□□ -0.08
LRFN1Q9P244 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.57□□□□□ -0.08
LRFN1Q9P244 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRFN1Q9P244 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LRFN1Q9P244 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.57□□□□□ -0.08
LRFN1Q9P244 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRFN1Q9P244 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRFN1Q9P244 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRFN1Q9P244 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRFN1Q9P244 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRFN1Q9P244 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.57□□□□□ -0.08
LRFN1Q9P244 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRFN1Q9P244 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
LRFN1Q9P244 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRFN1Q9P244 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
LRFN1Q9P244 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRFN1Q9P244 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.57□□□□□ -0.08
LRFN1Q9P244 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LRFN1Q9P244 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LRFN1Q9P244 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LRFN1Q9P244 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRFN1Q9P244 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
LRFN1Q9P244 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRFN1Q9P244 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRFN1Q9P244 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRFN1Q9P244 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.56□□□□□ -0.08
LRFN1Q9P244 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRFN1Q9P244 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRFN1Q9P244 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.56□□□□□ -0.08
LRFN1Q9P244 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
LRFN1Q9P244 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
LRFN1Q9P244 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LRFN1Q9P244 AL365209.1-201ENST00000624418 6473 ntBASIC14.56□□□□□ -0.08
LRFN1Q9P244 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.56□□□□□ -0.08
LRFN1Q9P244 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LRFN1Q9P244 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRFN1Q9P244 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRFN1Q9P244 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.56□□□□□ -0.08
LRFN1Q9P244 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.56□□□□□ -0.08
LRFN1Q9P244 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
LRFN1Q9P244 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRFN1Q9P244 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.56□□□□□ -0.08
LRFN1Q9P244 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.56□□□□□ -0.08
LRFN1Q9P244 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.56□□□□□ -0.08
LRFN1Q9P244 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.56□□□□□ -0.08
LRFN1Q9P244 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
LRFN1Q9P244 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRFN1Q9P244 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRFN1Q9P244 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRFN1Q9P244 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRFN1Q9P244 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRFN1Q9P244 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRFN1Q9P244 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRFN1Q9P244 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRFN1Q9P244 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRFN1Q9P244 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRFN1Q9P244 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRFN1Q9P244 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
LRFN1Q9P244 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRFN1Q9P244 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LRFN1Q9P244 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.56□□□□□ -0.08
LRFN1Q9P244 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRFN1Q9P244 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.56□□□□□ -0.08
LRFN1Q9P244 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms