Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.16□□□□□ -0.3
CALYQ9NYX4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
CALYQ9NYX4 AP001059.3-201ENST00000619053 235 ntBASIC13.16□□□□□ -0.3
CALYQ9NYX4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.16□□□□□ -0.3
CALYQ9NYX4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CALYQ9NYX4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CALYQ9NYX4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.16□□□□□ -0.3
CALYQ9NYX4 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CALYQ9NYX4 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.16□□□□□ -0.3
CALYQ9NYX4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CALYQ9NYX4 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CALYQ9NYX4 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CALYQ9NYX4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CALYQ9NYX4 AL035456.1-201ENST00000456064 1369 ntBASIC13.16□□□□□ -0.3
CALYQ9NYX4 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
CALYQ9NYX4 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
CALYQ9NYX4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.16□□□□□ -0.3
CALYQ9NYX4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CALYQ9NYX4 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CALYQ9NYX4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CALYQ9NYX4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CALYQ9NYX4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.16□□□□□ -0.3
CALYQ9NYX4 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CALYQ9NYX4 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CALYQ9NYX4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CALYQ9NYX4 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CALYQ9NYX4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.15□□□□□ -0.3
CALYQ9NYX4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CALYQ9NYX4 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.15□□□□□ -0.3
CALYQ9NYX4 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.15□□□□□ -0.3
CALYQ9NYX4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.15□□□□□ -0.3
CALYQ9NYX4 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CALYQ9NYX4 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.15□□□□□ -0.3
CALYQ9NYX4 HYMAI-201ENST00000635591 3347 ntBASIC13.15□□□□□ -0.3
CALYQ9NYX4 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CALYQ9NYX4 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CALYQ9NYX4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CALYQ9NYX4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CALYQ9NYX4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CALYQ9NYX4 AC020658.6-201ENST00000623564 1870 ntBASIC13.15□□□□□ -0.3
CALYQ9NYX4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.15□□□□□ -0.3
CALYQ9NYX4 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CALYQ9NYX4 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CALYQ9NYX4 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.15□□□□□ -0.3
CALYQ9NYX4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.15□□□□□ -0.3
CALYQ9NYX4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CALYQ9NYX4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.15□□□□□ -0.3
CALYQ9NYX4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CALYQ9NYX4 MTND6P24-201ENST00000440466 518 ntBASIC13.15□□□□□ -0.3
CALYQ9NYX4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.15□□□□□ -0.3
CALYQ9NYX4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.15□□□□□ -0.3
CALYQ9NYX4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CALYQ9NYX4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.15□□□□□ -0.3
CALYQ9NYX4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.15□□□□□ -0.3
CALYQ9NYX4 MIR4313-201ENST00000580760 101 ntBASIC13.15□□□□□ -0.3
CALYQ9NYX4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC13.15□□□□□ -0.3
CALYQ9NYX4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.15□□□□□ -0.3
CALYQ9NYX4 AC027612.4-201ENST00000605371 583 ntBASIC13.15□□□□□ -0.3
CALYQ9NYX4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.15□□□□□ -0.3
CALYQ9NYX4 AC079781.4-201ENST00000641908 219 ntBASIC13.15□□□□□ -0.3
CALYQ9NYX4 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CALYQ9NYX4 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CALYQ9NYX4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.15□□□□□ -0.3
CALYQ9NYX4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.15□□□□□ -0.3
CALYQ9NYX4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CALYQ9NYX4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CALYQ9NYX4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CALYQ9NYX4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CALYQ9NYX4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.15□□□□□ -0.3
CALYQ9NYX4 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
CALYQ9NYX4 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CALYQ9NYX4 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CALYQ9NYX4 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CALYQ9NYX4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CALYQ9NYX4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.15□□□□□ -0.3
CALYQ9NYX4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.15□□□□□ -0.3
CALYQ9NYX4 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CALYQ9NYX4 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CALYQ9NYX4 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.15□□□□□ -0.31
CALYQ9NYX4 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CALYQ9NYX4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.15□□□□□ -0.31
CALYQ9NYX4 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
CALYQ9NYX4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CALYQ9NYX4 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.14□□□□□ -0.31
CALYQ9NYX4 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
CALYQ9NYX4 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
CALYQ9NYX4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.14□□□□□ -0.31
CALYQ9NYX4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.14□□□□□ -0.31
CALYQ9NYX4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CALYQ9NYX4 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CALYQ9NYX4 AC092127.1-201ENST00000567093 3455 ntBASIC13.14□□□□□ -0.31
CALYQ9NYX4 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CALYQ9NYX4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CALYQ9NYX4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CALYQ9NYX4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CALYQ9NYX4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CALYQ9NYX4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.14□□□□□ -0.31
CALYQ9NYX4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.14□□□□□ -0.31
CALYQ9NYX4 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CALYQ9NYX4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms