Protein–RNA interactions for Protein: Q9NVI7

ATAD3A, ATPase family AAA domain-containing protein 3A, humanhuman

Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3AQ9NVI7 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 AL590627.1-203ENST00000421194 1026 ntBASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 AC098859.1-201ENST00000502915 1238 ntBASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 AC105233.2-201ENST00000523697 349 ntBASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 AF228730.5-201ENST00000530288 346 ntBASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 AC027601.4-201ENST00000611259 610 ntBASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATAD3AQ9NVI7 AC073347.1-201ENST00000421633 2643 ntBASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 AC073389.1-201ENST00000595595 795 ntBASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 AKAP8P1-201ENST00000434743 1349 ntBASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 GRK6P1-201ENST00000400595 1711 ntBASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 AL161772.1-201ENST00000610494 4412 ntBASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 OR2I1P-210ENST00000642037 4691 ntBASIC15.31■□□□□ 0.04
ATAD3AQ9NVI7 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATAD3AQ9NVI7 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATAD3AQ9NVI7 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATAD3AQ9NVI7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATAD3AQ9NVI7 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATAD3AQ9NVI7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATAD3AQ9NVI7 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATAD3AQ9NVI7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATAD3AQ9NVI7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATAD3AQ9NVI7 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATAD3AQ9NVI7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
ATAD3AQ9NVI7 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATAD3AQ9NVI7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATAD3AQ9NVI7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
ATAD3AQ9NVI7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATAD3AQ9NVI7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.3■□□□□ 0.04
ATAD3AQ9NVI7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.3■□□□□ 0.04
ATAD3AQ9NVI7 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATAD3AQ9NVI7 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATAD3AQ9NVI7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ATAD3AQ9NVI7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.3■□□□□ 0.04
ATAD3AQ9NVI7 MED15P5-201ENST00000423150 992 ntBASIC15.3■□□□□ 0.04
ATAD3AQ9NVI7 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATAD3AQ9NVI7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.3■□□□□ 0.04
ATAD3AQ9NVI7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms