Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 REXO1L1P-202ENST00000608646 1974 ntBASIC16.75■□□□□ 0.27
TLR9Q9NR96 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TLR9Q9NR96 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TLR9Q9NR96 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TLR9Q9NR96 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TLR9Q9NR96 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
TLR9Q9NR96 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TLR9Q9NR96 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.74■□□□□ 0.27
TLR9Q9NR96 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TLR9Q9NR96 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TLR9Q9NR96 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TLR9Q9NR96 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.74■□□□□ 0.27
TLR9Q9NR96 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TLR9Q9NR96 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TLR9Q9NR96 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TLR9Q9NR96 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TLR9Q9NR96 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TLR9Q9NR96 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TLR9Q9NR96 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TLR9Q9NR96 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TLR9Q9NR96 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TLR9Q9NR96 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TLR9Q9NR96 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.74■□□□□ 0.27
TLR9Q9NR96 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
TLR9Q9NR96 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.74■□□□□ 0.27
TLR9Q9NR96 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.74■□□□□ 0.27
TLR9Q9NR96 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TLR9Q9NR96 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TLR9Q9NR96 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.74■□□□□ 0.27
TLR9Q9NR96 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TLR9Q9NR96 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TLR9Q9NR96 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TLR9Q9NR96 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TLR9Q9NR96 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.74■□□□□ 0.27
TLR9Q9NR96 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.74■□□□□ 0.27
TLR9Q9NR96 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.74■□□□□ 0.27
TLR9Q9NR96 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TLR9Q9NR96 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
TLR9Q9NR96 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TLR9Q9NR96 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TLR9Q9NR96 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TLR9Q9NR96 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TLR9Q9NR96 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TLR9Q9NR96 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TLR9Q9NR96 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TLR9Q9NR96 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.74■□□□□ 0.27
TLR9Q9NR96 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TLR9Q9NR96 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TLR9Q9NR96 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TLR9Q9NR96 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.74■□□□□ 0.27
TLR9Q9NR96 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.74■□□□□ 0.27
TLR9Q9NR96 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.74■□□□□ 0.27
TLR9Q9NR96 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TLR9Q9NR96 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TLR9Q9NR96 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TLR9Q9NR96 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TLR9Q9NR96 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.73■□□□□ 0.27
TLR9Q9NR96 AC134407.2-201ENST00000625089 1978 ntBASIC16.73■□□□□ 0.27
TLR9Q9NR96 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.73■□□□□ 0.27
TLR9Q9NR96 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TLR9Q9NR96 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TLR9Q9NR96 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
TLR9Q9NR96 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TLR9Q9NR96 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.73■□□□□ 0.27
TLR9Q9NR96 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.73■□□□□ 0.27
TLR9Q9NR96 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TLR9Q9NR96 ACKR1-201ENST00000368121 1240 ntBASIC16.73■□□□□ 0.27
TLR9Q9NR96 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.73■□□□□ 0.27
TLR9Q9NR96 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.73■□□□□ 0.27
TLR9Q9NR96 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.73■□□□□ 0.27
TLR9Q9NR96 AC022137.2-201ENST00000503482 481 ntBASIC16.73■□□□□ 0.27
TLR9Q9NR96 GNRHR2-203ENST00000581100 1187 ntBASIC16.73■□□□□ 0.27
TLR9Q9NR96 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.73■□□□□ 0.27
TLR9Q9NR96 AL121723.1-201ENST00000445194 1519 ntBASIC16.73■□□□□ 0.27
TLR9Q9NR96 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TLR9Q9NR96 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TLR9Q9NR96 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TLR9Q9NR96 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TLR9Q9NR96 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.73■□□□□ 0.27
TLR9Q9NR96 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
TLR9Q9NR96 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TLR9Q9NR96 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TLR9Q9NR96 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TLR9Q9NR96 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.73■□□□□ 0.27
TLR9Q9NR96 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TLR9Q9NR96 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TLR9Q9NR96 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TLR9Q9NR96 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.72■□□□□ 0.27
TLR9Q9NR96 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TLR9Q9NR96 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TLR9Q9NR96 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TLR9Q9NR96 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TLR9Q9NR96 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.72■□□□□ 0.27
TLR9Q9NR96 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.72■□□□□ 0.27
TLR9Q9NR96 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TLR9Q9NR96 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.72■□□□□ 0.27
TLR9Q9NR96 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TLR9Q9NR96 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TLR9Q9NR96 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TLR9Q9NR96 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms