Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 AC018892.3-201ENST00000623986 2499 ntBASIC14.41□□□□□ -0.1
CHD8Q9HCK8 AC148477.4-201ENST00000613430 1793 ntBASIC14.41□□□□□ -0.1
CHD8Q9HCK8 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 PCGF3-213ENST00000620529 1899 ntBASIC14.41□□□□□ -0.1
CHD8Q9HCK8 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 HNRNPA1P58-201ENST00000403629 610 ntBASIC14.41□□□□□ -0.1
CHD8Q9HCK8 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 AC093752.3-201ENST00000567343 901 ntBASIC14.41□□□□□ -0.1
CHD8Q9HCK8 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 BCAS2P2-201ENST00000425064 674 ntBASIC14.4□□□□□ -0.1
CHD8Q9HCK8 RPL8P2-201ENST00000430538 502 ntBASIC14.4□□□□□ -0.1
CHD8Q9HCK8 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 AP003398.1-201ENST00000531124 318 ntBASIC14.4□□□□□ -0.1
CHD8Q9HCK8 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 HMGB1P24-201ENST00000611897 328 ntBASIC14.4□□□□□ -0.1
CHD8Q9HCK8 AL162426.1-201ENST00000624141 743 ntBASIC14.4□□□□□ -0.1
CHD8Q9HCK8 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 AL627422.1-201ENST00000434104 580 ntBASIC14.4□□□□□ -0.1
CHD8Q9HCK8 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 AC009955.4-201ENST00000597192 544 ntBASIC14.4□□□□□ -0.1
CHD8Q9HCK8 AC006548.2-201ENST00000605217 529 ntBASIC14.4□□□□□ -0.1
CHD8Q9HCK8 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHD8Q9HCK8 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 AC008805.1-201ENST00000590892 364 ntBASIC14.39□□□□□ -0.11
CHD8Q9HCK8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 BX323043.1-201ENST00000641006 1765 ntBASIC14.39□□□□□ -0.11
CHD8Q9HCK8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms