Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIF1Q9H611 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PIF1Q9H611 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.26■□□□□ 0.03
PIF1Q9H611 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.26■□□□□ 0.03
PIF1Q9H611 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.26■□□□□ 0.03
PIF1Q9H611 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.26■□□□□ 0.03
PIF1Q9H611 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIF1Q9H611 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.26■□□□□ 0.03
PIF1Q9H611 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIF1Q9H611 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIF1Q9H611 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PIF1Q9H611 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.26■□□□□ 0.03
PIF1Q9H611 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIF1Q9H611 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIF1Q9H611 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIF1Q9H611 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIF1Q9H611 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.26■□□□□ 0.03
PIF1Q9H611 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PIF1Q9H611 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PIF1Q9H611 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PIF1Q9H611 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.26■□□□□ 0.03
PIF1Q9H611 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.25■□□□□ 0.03
PIF1Q9H611 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PIF1Q9H611 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PIF1Q9H611 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.25■□□□□ 0.03
PIF1Q9H611 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PIF1Q9H611 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PIF1Q9H611 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PIF1Q9H611 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PIF1Q9H611 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PIF1Q9H611 ST20-AS1-201ENST00000560255 4223 ntBASIC15.25■□□□□ 0.03
PIF1Q9H611 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PIF1Q9H611 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PIF1Q9H611 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PIF1Q9H611 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PIF1Q9H611 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.25■□□□□ 0.03
PIF1Q9H611 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PIF1Q9H611 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PIF1Q9H611 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PIF1Q9H611 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PIF1Q9H611 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.25■□□□□ 0.03
PIF1Q9H611 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.25■□□□□ 0.03
PIF1Q9H611 PMS2P4-201ENST00000412466 1052 ntBASIC15.25■□□□□ 0.03
PIF1Q9H611 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.25■□□□□ 0.03
PIF1Q9H611 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.25■□□□□ 0.03
PIF1Q9H611 MIR4751-201ENST00000578027 74 ntBASIC15.25■□□□□ 0.03
PIF1Q9H611 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PIF1Q9H611 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PIF1Q9H611 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.25■□□□□ 0.03
PIF1Q9H611 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PIF1Q9H611 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.25■□□□□ 0.03
PIF1Q9H611 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
PIF1Q9H611 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.25■□□□□ 0.03
PIF1Q9H611 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PIF1Q9H611 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PIF1Q9H611 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.25■□□□□ 0.03
PIF1Q9H611 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.25■□□□□ 0.03
PIF1Q9H611 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PIF1Q9H611 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PIF1Q9H611 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.25■□□□□ 0.03
PIF1Q9H611 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PIF1Q9H611 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PIF1Q9H611 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.25■□□□□ 0.03
PIF1Q9H611 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PIF1Q9H611 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PIF1Q9H611 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PIF1Q9H611 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PIF1Q9H611 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PIF1Q9H611 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PIF1Q9H611 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PIF1Q9H611 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PIF1Q9H611 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PIF1Q9H611 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PIF1Q9H611 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PIF1Q9H611 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PIF1Q9H611 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PIF1Q9H611 RNA5SP419-201ENST00000515908 135 ntBASIC15.24■□□□□ 0.03
PIF1Q9H611 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.24■□□□□ 0.03
PIF1Q9H611 AL031432.2-201ENST00000566714 459 ntBASIC15.24■□□□□ 0.03
PIF1Q9H611 AL928711.1-201ENST00000570165 459 ntBASIC15.24■□□□□ 0.03
PIF1Q9H611 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.24■□□□□ 0.03
PIF1Q9H611 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
PIF1Q9H611 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PIF1Q9H611 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PIF1Q9H611 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PIF1Q9H611 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PIF1Q9H611 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PIF1Q9H611 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PIF1Q9H611 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PIF1Q9H611 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
PIF1Q9H611 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.24■□□□□ 0.03
PIF1Q9H611 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.24■□□□□ 0.03
PIF1Q9H611 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PIF1Q9H611 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PIF1Q9H611 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PIF1Q9H611 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
PIF1Q9H611 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PIF1Q9H611 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PIF1Q9H611 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PIF1Q9H611 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms