Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 AL592424.1-201ENST00000563624 1536 ntBASIC12.71□□□□□ -0.38
CHRDL1Q9BU40 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CHRDL1Q9BU40 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CHRDL1Q9BU40 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
CHRDL1Q9BU40 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC12.71□□□□□ -0.38
CHRDL1Q9BU40 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CHRDL1Q9BU40 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC12.71□□□□□ -0.38
CHRDL1Q9BU40 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CHRDL1Q9BU40 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CHRDL1Q9BU40 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 U82695.1-201ENST00000635752 1889 ntBASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 AC073347.1-201ENST00000421633 2643 ntBASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 AC023157.3-201ENST00000619086 2088 ntBASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 MIR940-201ENST00000401276 94 ntBASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 AP002472.1-201ENST00000577490 586 ntBASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
CHRDL1Q9BU40 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 RELA-227ENST00000615805 2236 ntTSL 5 BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms