Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 AC099522.2-201ENST00000607001 744 ntBASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 HLA-A-201ENST00000376802 1334 ntBASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 AKAP8P1-201ENST00000434743 1349 ntBASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 FAM45BP-202ENST00000592932 1624 ntBASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 OR2I1P-209ENST00000641730 5365 ntBASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 AC007967.2-201ENST00000432613 625 ntBASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 FOXO1B-201ENST00000504678 1527 ntBASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 AC126365.1-201ENST00000578585 1514 ntBASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 MYO15B-237ENST00000642007 4893 ntBASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 AC009090.5-201ENST00000624886 2285 ntBASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
SHANK2-AS3Q9BTD1 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms