Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
USB1Q9BQ65 AC144831.1-201ENST00000573312 2656 ntBASIC14.33□□□□□ -0.12
USB1Q9BQ65 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
USB1Q9BQ65 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
USB1Q9BQ65 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
USB1Q9BQ65 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
USB1Q9BQ65 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
USB1Q9BQ65 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
USB1Q9BQ65 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.33□□□□□ -0.12
USB1Q9BQ65 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
USB1Q9BQ65 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.33□□□□□ -0.12
USB1Q9BQ65 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC14.33□□□□□ -0.12
USB1Q9BQ65 AC093724.1-201ENST00000448659 1027 ntBASIC14.33□□□□□ -0.12
USB1Q9BQ65 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
USB1Q9BQ65 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.33□□□□□ -0.12
USB1Q9BQ65 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.33□□□□□ -0.12
USB1Q9BQ65 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.33□□□□□ -0.12
USB1Q9BQ65 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.33□□□□□ -0.12
USB1Q9BQ65 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.33□□□□□ -0.12
USB1Q9BQ65 AL353708.1-201ENST00000567904 1257 ntBASIC14.33□□□□□ -0.12
USB1Q9BQ65 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.33□□□□□ -0.12
USB1Q9BQ65 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
USB1Q9BQ65 AC087289.4-201ENST00000587348 230 ntTSL 3 BASIC14.33□□□□□ -0.12
USB1Q9BQ65 AL365330.1-201ENST00000607459 531 ntBASIC14.33□□□□□ -0.12
USB1Q9BQ65 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
USB1Q9BQ65 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.33□□□□□ -0.12
USB1Q9BQ65 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
USB1Q9BQ65 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
USB1Q9BQ65 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
USB1Q9BQ65 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.33□□□□□ -0.12
USB1Q9BQ65 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
USB1Q9BQ65 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.33□□□□□ -0.12
USB1Q9BQ65 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
USB1Q9BQ65 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
USB1Q9BQ65 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
USB1Q9BQ65 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
USB1Q9BQ65 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.33□□□□□ -0.12
USB1Q9BQ65 CASC19-229ENST00000641418 1373 ntBASIC14.33□□□□□ -0.12
USB1Q9BQ65 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
USB1Q9BQ65 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.33□□□□□ -0.12
USB1Q9BQ65 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
USB1Q9BQ65 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
USB1Q9BQ65 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.32□□□□□ -0.12
USB1Q9BQ65 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
USB1Q9BQ65 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
USB1Q9BQ65 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
USB1Q9BQ65 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
USB1Q9BQ65 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
USB1Q9BQ65 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
USB1Q9BQ65 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.32□□□□□ -0.12
USB1Q9BQ65 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.32□□□□□ -0.12
USB1Q9BQ65 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
USB1Q9BQ65 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.32□□□□□ -0.12
USB1Q9BQ65 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.32□□□□□ -0.12
USB1Q9BQ65 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
USB1Q9BQ65 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
USB1Q9BQ65 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
USB1Q9BQ65 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
USB1Q9BQ65 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
USB1Q9BQ65 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
USB1Q9BQ65 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
USB1Q9BQ65 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
USB1Q9BQ65 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
USB1Q9BQ65 SMIM26-201ENST00000411646 505 ntAPPRIS P5 TSL 1 (best) BASIC14.32□□□□□ -0.12
USB1Q9BQ65 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
USB1Q9BQ65 FAM8A3P-201ENST00000427218 844 ntBASIC14.32□□□□□ -0.12
USB1Q9BQ65 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
USB1Q9BQ65 BTG3P1-201ENST00000435859 716 ntBASIC14.32□□□□□ -0.12
USB1Q9BQ65 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.32□□□□□ -0.12
USB1Q9BQ65 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.32□□□□□ -0.12
USB1Q9BQ65 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
USB1Q9BQ65 AL512638.1-201ENST00000457493 794 ntBASIC14.32□□□□□ -0.12
USB1Q9BQ65 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.32□□□□□ -0.12
USB1Q9BQ65 HLA-V-204ENST00000476601 1289 ntBASIC14.32□□□□□ -0.12
USB1Q9BQ65 INGX-202ENST00000489074 768 ntBASIC14.32□□□□□ -0.12
USB1Q9BQ65 MIR4453-201ENST00000584019 89 ntBASIC14.32□□□□□ -0.12
USB1Q9BQ65 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.32□□□□□ -0.12
USB1Q9BQ65 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
USB1Q9BQ65 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.32□□□□□ -0.12
USB1Q9BQ65 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.32□□□□□ -0.12
USB1Q9BQ65 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.32□□□□□ -0.12
USB1Q9BQ65 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
USB1Q9BQ65 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
USB1Q9BQ65 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
USB1Q9BQ65 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.32□□□□□ -0.12
USB1Q9BQ65 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
USB1Q9BQ65 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
USB1Q9BQ65 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
USB1Q9BQ65 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.32□□□□□ -0.12
USB1Q9BQ65 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
USB1Q9BQ65 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
USB1Q9BQ65 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
USB1Q9BQ65 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
USB1Q9BQ65 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
USB1Q9BQ65 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
USB1Q9BQ65 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
USB1Q9BQ65 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
USB1Q9BQ65 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.31□□□□□ -0.12
USB1Q9BQ65 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
USB1Q9BQ65 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms