Protein–RNA interactions for Protein: Q99853

FOXB1, Forkhead box protein B1, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXB1Q99853 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FOXB1Q99853 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXB1Q99853 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
FOXB1Q99853 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FOXB1Q99853 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.97□□□□□ -0.17
FOXB1Q99853 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FOXB1Q99853 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FOXB1Q99853 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.97□□□□□ -0.17
FOXB1Q99853 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.97□□□□□ -0.17
FOXB1Q99853 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
FOXB1Q99853 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
FOXB1Q99853 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.97□□□□□ -0.17
FOXB1Q99853 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.97□□□□□ -0.17
FOXB1Q99853 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.97□□□□□ -0.17
FOXB1Q99853 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.97□□□□□ -0.17
FOXB1Q99853 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.97□□□□□ -0.17
FOXB1Q99853 RFPL4AP1-201ENST00000530883 850 ntBASIC13.97□□□□□ -0.17
FOXB1Q99853 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FOXB1Q99853 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.97□□□□□ -0.17
FOXB1Q99853 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.97□□□□□ -0.17
FOXB1Q99853 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.97□□□□□ -0.17
FOXB1Q99853 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.97□□□□□ -0.17
FOXB1Q99853 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXB1Q99853 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXB1Q99853 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.97□□□□□ -0.17
FOXB1Q99853 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FOXB1Q99853 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXB1Q99853 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXB1Q99853 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXB1Q99853 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXB1Q99853 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.97□□□□□ -0.17
FOXB1Q99853 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
FOXB1Q99853 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FOXB1Q99853 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXB1Q99853 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FOXB1Q99853 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
FOXB1Q99853 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
FOXB1Q99853 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.97□□□□□ -0.17
FOXB1Q99853 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
FOXB1Q99853 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXB1Q99853 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.97□□□□□ -0.17
FOXB1Q99853 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXB1Q99853 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXB1Q99853 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXB1Q99853 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXB1Q99853 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
FOXB1Q99853 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.96□□□□□ -0.17
FOXB1Q99853 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.96□□□□□ -0.17
FOXB1Q99853 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.96□□□□□ -0.17
FOXB1Q99853 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
FOXB1Q99853 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
FOXB1Q99853 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXB1Q99853 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXB1Q99853 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXB1Q99853 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.96□□□□□ -0.17
FOXB1Q99853 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXB1Q99853 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
FOXB1Q99853 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.96□□□□□ -0.17
FOXB1Q99853 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.96□□□□□ -0.17
FOXB1Q99853 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.96□□□□□ -0.17
FOXB1Q99853 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.96□□□□□ -0.17
FOXB1Q99853 AC136604.1-201ENST00000418535 575 ntBASIC13.96□□□□□ -0.17
FOXB1Q99853 AC241585.1-201ENST00000433527 519 ntBASIC13.96□□□□□ -0.17
FOXB1Q99853 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.96□□□□□ -0.17
FOXB1Q99853 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.96□□□□□ -0.17
FOXB1Q99853 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.96□□□□□ -0.17
FOXB1Q99853 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.96□□□□□ -0.17
FOXB1Q99853 AL512361.1-201ENST00000554200 418 ntBASIC13.96□□□□□ -0.17
FOXB1Q99853 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
FOXB1Q99853 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.96□□□□□ -0.17
FOXB1Q99853 MIR4313-201ENST00000580760 101 ntBASIC13.96□□□□□ -0.17
FOXB1Q99853 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.96□□□□□ -0.17
FOXB1Q99853 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
FOXB1Q99853 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.96□□□□□ -0.17
FOXB1Q99853 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
FOXB1Q99853 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.96□□□□□ -0.17
FOXB1Q99853 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.96□□□□□ -0.17
FOXB1Q99853 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.96□□□□□ -0.17
FOXB1Q99853 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
FOXB1Q99853 AC100757.3-201ENST00000622361 1406 ntBASIC13.96□□□□□ -0.18
FOXB1Q99853 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
FOXB1Q99853 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
FOXB1Q99853 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
FOXB1Q99853 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.96□□□□□ -0.18
FOXB1Q99853 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
FOXB1Q99853 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.96□□□□□ -0.18
FOXB1Q99853 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.96□□□□□ -0.18
FOXB1Q99853 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.96□□□□□ -0.18
FOXB1Q99853 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
FOXB1Q99853 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
FOXB1Q99853 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FOXB1Q99853 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FOXB1Q99853 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FOXB1Q99853 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FOXB1Q99853 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
FOXB1Q99853 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.95□□□□□ -0.18
FOXB1Q99853 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
FOXB1Q99853 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FOXB1Q99853 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.95□□□□□ -0.18
FOXB1Q99853 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms