Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.55■□□□□ 0.24
SMOQ99835 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.55■□□□□ 0.24
SMOQ99835 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMOQ99835 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMOQ99835 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SMOQ99835 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SMOQ99835 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SMOQ99835 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SMOQ99835 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.54■□□□□ 0.24
SMOQ99835 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SMOQ99835 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMOQ99835 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMOQ99835 AL139384.1-201ENST00000612143 3047 ntBASIC16.54■□□□□ 0.24
SMOQ99835 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
SMOQ99835 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.54■□□□□ 0.24
SMOQ99835 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.54■□□□□ 0.24
SMOQ99835 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMOQ99835 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMOQ99835 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMOQ99835 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SMOQ99835 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.54■□□□□ 0.24
SMOQ99835 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SMOQ99835 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMOQ99835 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SMOQ99835 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SMOQ99835 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMOQ99835 KRT18P43-201ENST00000469825 1281 ntBASIC16.54■□□□□ 0.24
SMOQ99835 FAM86LP-201ENST00000478302 853 ntBASIC16.54■□□□□ 0.24
SMOQ99835 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SMOQ99835 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.54■□□□□ 0.24
SMOQ99835 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.54■□□□□ 0.24
SMOQ99835 AC005225.4-201ENST00000557330 545 ntBASIC16.54■□□□□ 0.24
SMOQ99835 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.54■□□□□ 0.24
SMOQ99835 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.54■□□□□ 0.24
SMOQ99835 AC000095.1-201ENST00000603208 874 ntBASIC16.54■□□□□ 0.24
SMOQ99835 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.54■□□□□ 0.24
SMOQ99835 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.54■□□□□ 0.24
SMOQ99835 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.54■□□□□ 0.24
SMOQ99835 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMOQ99835 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SMOQ99835 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.54■□□□□ 0.24
SMOQ99835 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SMOQ99835 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.54■□□□□ 0.24
SMOQ99835 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SMOQ99835 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMOQ99835 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SMOQ99835 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.54■□□□□ 0.24
SMOQ99835 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMOQ99835 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.54■□□□□ 0.24
SMOQ99835 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMOQ99835 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMOQ99835 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.54■□□□□ 0.24
SMOQ99835 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMOQ99835 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMOQ99835 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMOQ99835 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.54■□□□□ 0.24
SMOQ99835 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMOQ99835 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.54■□□□□ 0.24
SMOQ99835 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
SMOQ99835 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMOQ99835 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SMOQ99835 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMOQ99835 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMOQ99835 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.53■□□□□ 0.24
SMOQ99835 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.53■□□□□ 0.24
SMOQ99835 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMOQ99835 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMOQ99835 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SMOQ99835 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMOQ99835 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMOQ99835 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SMOQ99835 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMOQ99835 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMOQ99835 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
SMOQ99835 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.53■□□□□ 0.24
SMOQ99835 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.53■□□□□ 0.24
SMOQ99835 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.53■□□□□ 0.24
SMOQ99835 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
SMOQ99835 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SMOQ99835 AC015910.1-201ENST00000579400 975 ntBASIC16.53■□□□□ 0.24
SMOQ99835 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.53■□□□□ 0.24
SMOQ99835 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.53■□□□□ 0.24
SMOQ99835 TMEM261P1-201ENST00000604899 340 ntBASIC16.53■□□□□ 0.24
SMOQ99835 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMOQ99835 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SMOQ99835 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMOQ99835 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMOQ99835 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.53■□□□□ 0.24
SMOQ99835 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.53■□□□□ 0.24
SMOQ99835 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMOQ99835 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMOQ99835 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.53■□□□□ 0.24
SMOQ99835 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
SMOQ99835 AC022188.1-201ENST00000620960 1664 ntBASIC16.53■□□□□ 0.24
SMOQ99835 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMOQ99835 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMOQ99835 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMOQ99835 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMOQ99835 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMOQ99835 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms