Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GFI1Q99684 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
GFI1Q99684 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GFI1Q99684 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.69□□□□□ -0.22
GFI1Q99684 KRT18P67-201ENST00000432816 1264 ntBASIC13.69□□□□□ -0.22
GFI1Q99684 AC009947.1-201ENST00000444350 727 ntBASIC13.69□□□□□ -0.22
GFI1Q99684 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.69□□□□□ -0.22
GFI1Q99684 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.69□□□□□ -0.22
GFI1Q99684 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.69□□□□□ -0.22
GFI1Q99684 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.69□□□□□ -0.22
GFI1Q99684 AL049840.3-201ENST00000602669 611 ntBASIC13.69□□□□□ -0.22
GFI1Q99684 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.69□□□□□ -0.22
GFI1Q99684 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GFI1Q99684 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
GFI1Q99684 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GFI1Q99684 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GFI1Q99684 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GFI1Q99684 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
GFI1Q99684 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GFI1Q99684 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GFI1Q99684 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GFI1Q99684 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GFI1Q99684 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.69□□□□□ -0.22
GFI1Q99684 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GFI1Q99684 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.69□□□□□ -0.22
GFI1Q99684 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
GFI1Q99684 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GFI1Q99684 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.69□□□□□ -0.22
GFI1Q99684 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC13.68□□□□□ -0.22
GFI1Q99684 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
GFI1Q99684 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
GFI1Q99684 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GFI1Q99684 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GFI1Q99684 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFI1Q99684 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFI1Q99684 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
GFI1Q99684 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFI1Q99684 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GFI1Q99684 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFI1Q99684 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFI1Q99684 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFI1Q99684 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFI1Q99684 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFI1Q99684 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
GFI1Q99684 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFI1Q99684 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.68□□□□□ -0.22
GFI1Q99684 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GFI1Q99684 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFI1Q99684 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GFI1Q99684 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFI1Q99684 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFI1Q99684 AC004987.2-201ENST00000395959 1148 ntBASIC13.68□□□□□ -0.22
GFI1Q99684 RPS8P6-201ENST00000426177 609 ntBASIC13.68□□□□□ -0.22
GFI1Q99684 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC13.68□□□□□ -0.22
GFI1Q99684 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
GFI1Q99684 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC13.68□□□□□ -0.22
GFI1Q99684 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.68□□□□□ -0.22
GFI1Q99684 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.68□□□□□ -0.22
GFI1Q99684 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.68□□□□□ -0.22
GFI1Q99684 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.68□□□□□ -0.22
GFI1Q99684 AC073389.1-201ENST00000595595 795 ntBASIC13.68□□□□□ -0.22
GFI1Q99684 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFI1Q99684 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
GFI1Q99684 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
GFI1Q99684 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.68□□□□□ -0.22
GFI1Q99684 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFI1Q99684 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFI1Q99684 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.68□□□□□ -0.22
GFI1Q99684 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
GFI1Q99684 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFI1Q99684 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFI1Q99684 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFI1Q99684 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GFI1Q99684 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GFI1Q99684 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.68□□□□□ -0.22
GFI1Q99684 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GFI1Q99684 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GFI1Q99684 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GFI1Q99684 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GFI1Q99684 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.67□□□□□ -0.22
GFI1Q99684 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GFI1Q99684 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
GFI1Q99684 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
GFI1Q99684 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
GFI1Q99684 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GFI1Q99684 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GFI1Q99684 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.67□□□□□ -0.22
GFI1Q99684 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GFI1Q99684 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.67□□□□□ -0.22
GFI1Q99684 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
GFI1Q99684 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.67□□□□□ -0.22
GFI1Q99684 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GFI1Q99684 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GFI1Q99684 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
GFI1Q99684 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GFI1Q99684 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.67□□□□□ -0.22
GFI1Q99684 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GFI1Q99684 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.67□□□□□ -0.22
GFI1Q99684 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.67□□□□□ -0.22
GFI1Q99684 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms