Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 FAU-202ENST00000434372 533 ntTSL 2 BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 AC012362.1-201ENST00000434906 739 ntBASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 AC098935.1-201ENST00000446057 611 ntBASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 IGLV3-15-201ENST00000518356 244 ntBASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 RN7SL48P-201ENST00000579283 293 ntBASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 KRT18P64-201ENST00000434946 1219 ntBASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 GPAA1P2-202ENST00000606848 1787 ntBASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.28□□□□□ -0.28
CSMD1Q96PZ7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
CSMD1Q96PZ7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
CSMD1Q96PZ7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CSMD1Q96PZ7 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CSMD1Q96PZ7 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CSMD1Q96PZ7 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CSMD1Q96PZ7 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC13.27□□□□□ -0.28
CSMD1Q96PZ7 AC145423.3-201ENST00000615987 467 ntBASIC13.27□□□□□ -0.28
CSMD1Q96PZ7 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.27□□□□□ -0.28
CSMD1Q96PZ7 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.27□□□□□ -0.28
CSMD1Q96PZ7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CSMD1Q96PZ7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
CSMD1Q96PZ7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CSMD1Q96PZ7 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.27□□□□□ -0.28
CSMD1Q96PZ7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CSMD1Q96PZ7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CSMD1Q96PZ7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CSMD1Q96PZ7 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CSMD1Q96PZ7 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CSMD1Q96PZ7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CSMD1Q96PZ7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSMD1Q96PZ7 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CSMD1Q96PZ7 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
CSMD1Q96PZ7 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.27□□□□□ -0.29
CSMD1Q96PZ7 EEF1DP4-201ENST00000446006 880 ntBASIC13.27□□□□□ -0.29
CSMD1Q96PZ7 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms