Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.83□□□□□ -0.04
MS4A4EQ96PG1 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
MS4A4EQ96PG1 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.83□□□□□ -0.04
MS4A4EQ96PG1 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
MS4A4EQ96PG1 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MS4A4EQ96PG1 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MS4A4EQ96PG1 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.83□□□□□ -0.04
MS4A4EQ96PG1 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.83□□□□□ -0.04
MS4A4EQ96PG1 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MS4A4EQ96PG1 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MS4A4EQ96PG1 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
MS4A4EQ96PG1 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MS4A4EQ96PG1 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 AC087481.3-201ENST00000602886 1894 ntBASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 AC104640.1-201ENST00000562617 2109 ntBASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 AC079781.4-201ENST00000641908 219 ntBASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 NORAD-201ENST00000565493 5339 ntBASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 SSR4P1-203ENST00000599569 2260 ntBASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.82□□□□□ -0.04
MS4A4EQ96PG1 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 AC105250.1-201ENST00000509378 2057 ntBASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 AC126177.1-201ENST00000547829 2218 ntBASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 FO393414.2-201ENST00000405153 598 ntBASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 AC136604.1-201ENST00000418535 575 ntBASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 LINC00628-201ENST00000628516 1289 ntBASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 KRT8P12-202ENST00000472924 1397 ntBASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
MS4A4EQ96PG1 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms