Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 AC005730.2-201ENST00000564549 1184 ntBASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 AL353726.2-201ENST00000623259 884 ntBASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 HTR7P1-202ENST00000624664 4411 ntBASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 AC069218.1-201ENST00000435269 762 ntBASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 AP003419.4-201ENST00000616071 517 ntBASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 AC008132.1-202ENST00000342005 1389 ntBASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM43Q96BQ3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 AC022217.1-201ENST00000521069 738 ntBASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 AL645939.5-201ENST00000606834 243 ntBASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms