Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CPNE4Q96A23 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CPNE4Q96A23 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.29□□□□□ -0.12
CPNE4Q96A23 REXO1L1P-202ENST00000608646 1974 ntBASIC14.29□□□□□ -0.12
CPNE4Q96A23 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE4Q96A23 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE4Q96A23 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE4Q96A23 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
CPNE4Q96A23 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.29□□□□□ -0.12
CPNE4Q96A23 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
CPNE4Q96A23 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
CPNE4Q96A23 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE4Q96A23 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CPNE4Q96A23 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE4Q96A23 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.29□□□□□ -0.12
CPNE4Q96A23 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE4Q96A23 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE4Q96A23 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.29□□□□□ -0.12
CPNE4Q96A23 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.29□□□□□ -0.12
CPNE4Q96A23 BCRP1-201ENST00000444246 691 ntBASIC14.29□□□□□ -0.12
CPNE4Q96A23 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE4Q96A23 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.29□□□□□ -0.12
CPNE4Q96A23 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.29□□□□□ -0.12
CPNE4Q96A23 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.29□□□□□ -0.12
CPNE4Q96A23 AL512361.1-201ENST00000554200 418 ntBASIC14.29□□□□□ -0.12
CPNE4Q96A23 AC010336.2-201ENST00000564226 506 ntBASIC14.29□□□□□ -0.12
CPNE4Q96A23 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.29□□□□□ -0.12
CPNE4Q96A23 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.29□□□□□ -0.12
CPNE4Q96A23 AL844908.2-201ENST00000609461 460 ntBASIC14.29□□□□□ -0.12
CPNE4Q96A23 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CPNE4Q96A23 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE4Q96A23 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.29□□□□□ -0.12
CPNE4Q96A23 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.29□□□□□ -0.12
CPNE4Q96A23 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.29□□□□□ -0.12
CPNE4Q96A23 BTBD7P1-201ENST00000447253 1453 ntBASIC14.29□□□□□ -0.12
CPNE4Q96A23 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.29□□□□□ -0.12
CPNE4Q96A23 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE4Q96A23 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.29□□□□□ -0.12
CPNE4Q96A23 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE4Q96A23 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE4Q96A23 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CPNE4Q96A23 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE4Q96A23 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.29□□□□□ -0.12
CPNE4Q96A23 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE4Q96A23 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE4Q96A23 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE4Q96A23 CDC14C-201ENST00000428251 1719 ntBASIC14.29□□□□□ -0.12
CPNE4Q96A23 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.29□□□□□ -0.12
CPNE4Q96A23 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE4Q96A23 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.29□□□□□ -0.12
CPNE4Q96A23 LINC02447-202ENST00000501888 2146 ntBASIC14.29□□□□□ -0.12
CPNE4Q96A23 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.29□□□□□ -0.12
CPNE4Q96A23 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.29□□□□□ -0.12
CPNE4Q96A23 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.29□□□□□ -0.12
CPNE4Q96A23 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE4Q96A23 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE4Q96A23 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE4Q96A23 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE4Q96A23 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE4Q96A23 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE4Q96A23 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE4Q96A23 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.28□□□□□ -0.12
CPNE4Q96A23 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE4Q96A23 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE4Q96A23 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.28□□□□□ -0.12
CPNE4Q96A23 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CPNE4Q96A23 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE4Q96A23 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE4Q96A23 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE4Q96A23 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE4Q96A23 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.28□□□□□ -0.12
CPNE4Q96A23 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.28□□□□□ -0.12
CPNE4Q96A23 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE4Q96A23 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE4Q96A23 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
CPNE4Q96A23 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE4Q96A23 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE4Q96A23 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CPNE4Q96A23 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.28□□□□□ -0.12
CPNE4Q96A23 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.28□□□□□ -0.12
CPNE4Q96A23 AC009477.1-201ENST00000452936 217 ntBASIC14.28□□□□□ -0.12
CPNE4Q96A23 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.28□□□□□ -0.12
CPNE4Q96A23 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE4Q96A23 SDHAP3-202ENST00000515467 728 ntBASIC14.28□□□□□ -0.12
CPNE4Q96A23 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.28□□□□□ -0.12
CPNE4Q96A23 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.28□□□□□ -0.12
CPNE4Q96A23 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.28□□□□□ -0.12
CPNE4Q96A23 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.28□□□□□ -0.12
CPNE4Q96A23 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.28□□□□□ -0.12
CPNE4Q96A23 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE4Q96A23 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CPNE4Q96A23 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE4Q96A23 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE4Q96A23 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.28□□□□□ -0.12
CPNE4Q96A23 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.28□□□□□ -0.12
CPNE4Q96A23 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.28□□□□□ -0.12
CPNE4Q96A23 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE4Q96A23 AL450472.2-201ENST00000603663 1156 ntBASIC14.28□□□□□ -0.12
CPNE4Q96A23 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.28□□□□□ -0.12
CPNE4Q96A23 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 293.2 ms