Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHC3Q92529 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHC3Q92529 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHC3Q92529 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SHC3Q92529 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SHC3Q92529 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHC3Q92529 KLF2P3-201ENST00000451977 1087 ntBASIC16.89■□□□□ 0.29
SHC3Q92529 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.89■□□□□ 0.29
SHC3Q92529 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.89■□□□□ 0.29
SHC3Q92529 AC125807.1-201ENST00000483097 614 ntBASIC16.89■□□□□ 0.29
SHC3Q92529 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.89■□□□□ 0.29
SHC3Q92529 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.89■□□□□ 0.29
SHC3Q92529 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.89■□□□□ 0.29
SHC3Q92529 AC004449.1-201ENST00000564240 433 ntBASIC16.89■□□□□ 0.29
SHC3Q92529 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.89■□□□□ 0.29
SHC3Q92529 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.89■□□□□ 0.29
SHC3Q92529 AC093028.1-201ENST00000622998 982 ntBASIC16.89■□□□□ 0.29
SHC3Q92529 AC138035.3-201ENST00000622706 2791 ntBASIC16.89■□□□□ 0.29
SHC3Q92529 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
SHC3Q92529 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
SHC3Q92529 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SHC3Q92529 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHC3Q92529 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SHC3Q92529 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.89■□□□□ 0.29
SHC3Q92529 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHC3Q92529 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.89■□□□□ 0.29
SHC3Q92529 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHC3Q92529 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SHC3Q92529 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.89■□□□□ 0.29
SHC3Q92529 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SHC3Q92529 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHC3Q92529 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHC3Q92529 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SHC3Q92529 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHC3Q92529 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHC3Q92529 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHC3Q92529 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHC3Q92529 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHC3Q92529 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.88■□□□□ 0.29
SHC3Q92529 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHC3Q92529 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SHC3Q92529 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SHC3Q92529 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHC3Q92529 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SHC3Q92529 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHC3Q92529 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SHC3Q92529 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SHC3Q92529 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.88■□□□□ 0.29
SHC3Q92529 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.88■□□□□ 0.29
SHC3Q92529 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SHC3Q92529 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.88■□□□□ 0.29
SHC3Q92529 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.88■□□□□ 0.29
SHC3Q92529 AL512361.1-201ENST00000554200 418 ntBASIC16.88■□□□□ 0.29
SHC3Q92529 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHC3Q92529 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SHC3Q92529 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.88■□□□□ 0.29
SHC3Q92529 AC140878.1-201ENST00000565277 250 ntBASIC16.88■□□□□ 0.29
SHC3Q92529 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.88■□□□□ 0.29
SHC3Q92529 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHC3Q92529 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.88■□□□□ 0.29
SHC3Q92529 AC073592.8-201ENST00000624126 511 ntBASIC16.88■□□□□ 0.29
SHC3Q92529 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SHC3Q92529 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHC3Q92529 AC023157.3-201ENST00000619086 2088 ntBASIC16.88■□□□□ 0.29
SHC3Q92529 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SHC3Q92529 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SHC3Q92529 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHC3Q92529 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SHC3Q92529 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHC3Q92529 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHC3Q92529 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SHC3Q92529 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SHC3Q92529 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHC3Q92529 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.88■□□□□ 0.29
SHC3Q92529 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SHC3Q92529 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.87■□□□□ 0.29
SHC3Q92529 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHC3Q92529 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SHC3Q92529 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHC3Q92529 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHC3Q92529 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHC3Q92529 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.87■□□□□ 0.29
SHC3Q92529 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHC3Q92529 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SHC3Q92529 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHC3Q92529 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SHC3Q92529 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
SHC3Q92529 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHC3Q92529 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.87■□□□□ 0.29
SHC3Q92529 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.87■□□□□ 0.29
SHC3Q92529 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHC3Q92529 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHC3Q92529 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHC3Q92529 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.87■□□□□ 0.29
SHC3Q92529 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.87■□□□□ 0.29
SHC3Q92529 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.87■□□□□ 0.29
SHC3Q92529 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHC3Q92529 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHC3Q92529 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.87■□□□□ 0.29
SHC3Q92529 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms