Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.17■□□□□ 0.18
PTCD2Q8WV60 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTCD2Q8WV60 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTCD2Q8WV60 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTCD2Q8WV60 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 MIR943-201ENST00000401286 94 ntBASIC16.16■□□□□ 0.18
PTCD2Q8WV60 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 AC055748.1-201ENST00000489836 959 ntBASIC16.16■□□□□ 0.18
PTCD2Q8WV60 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCD2Q8WV60 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 ACTR6P1-201ENST00000514311 1104 ntBASIC16.15■□□□□ 0.18
PTCD2Q8WV60 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 AC026979.3-201ENST00000607315 403 ntBASIC16.15■□□□□ 0.18
PTCD2Q8WV60 AC003101.2-201ENST00000612557 442 ntBASIC16.15■□□□□ 0.18
PTCD2Q8WV60 AC018529.1-201ENST00000613063 361 ntBASIC16.15■□□□□ 0.18
PTCD2Q8WV60 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCD2Q8WV60 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms