Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
SNED1Q8TER0 AC126915.1-201ENST00000522847 1038 ntBASIC18.99■□□□□ 0.63
SNED1Q8TER0 RERG-205ENST00000537647 935 ntTSL 2 BASIC18.99■□□□□ 0.63
SNED1Q8TER0 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
SNED1Q8TER0 NKG7-204ENST00000595217 816 ntTSL 2 BASIC18.99■□□□□ 0.63
SNED1Q8TER0 NDUFV2P1-201ENST00000596415 907 ntBASIC18.99■□□□□ 0.63
SNED1Q8TER0 KLK11-210ENST00000600362 759 ntTSL 3 BASIC18.99■□□□□ 0.63
SNED1Q8TER0 HCG18-245ENST00000602550 559 ntTSL 4 BASIC18.99■□□□□ 0.63
SNED1Q8TER0 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC18.99■□□□□ 0.63
SNED1Q8TER0 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.99■□□□□ 0.63
SNED1Q8TER0 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SNED1Q8TER0 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNED1Q8TER0 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SNED1Q8TER0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNED1Q8TER0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNED1Q8TER0 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNED1Q8TER0 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNED1Q8TER0 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
SNED1Q8TER0 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SNED1Q8TER0 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNED1Q8TER0 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNED1Q8TER0 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNED1Q8TER0 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNED1Q8TER0 SMS-201ENST00000379404 1174 ntTSL 3 BASIC18.98■□□□□ 0.63
SNED1Q8TER0 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNED1Q8TER0 MPV17-205ENST00000402310 906 ntTSL 5 BASIC18.98■□□□□ 0.63
SNED1Q8TER0 TISP43-201ENST00000409793 538 ntTSL 4 BASIC18.98■□□□□ 0.63
SNED1Q8TER0 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNED1Q8TER0 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC18.98■□□□□ 0.63
SNED1Q8TER0 HINT2P1-201ENST00000419438 481 ntBASIC18.98■□□□□ 0.63
SNED1Q8TER0 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC18.98■□□□□ 0.63
SNED1Q8TER0 PTPA-218ENST00000435132 618 ntTSL 2 BASIC18.98■□□□□ 0.63
SNED1Q8TER0 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC18.98■□□□□ 0.63
SNED1Q8TER0 SDHD-202ENST00000525291 790 ntTSL 3 BASIC18.98■□□□□ 0.63
SNED1Q8TER0 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNED1Q8TER0 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNED1Q8TER0 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNED1Q8TER0 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNED1Q8TER0 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
SNED1Q8TER0 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.97■□□□□ 0.63
SNED1Q8TER0 AC020916.1-201ENST00000587762 1774 ntBASIC18.97■□□□□ 0.63
SNED1Q8TER0 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SNED1Q8TER0 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.97■□□□□ 0.63
SNED1Q8TER0 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.97■□□□□ 0.63
SNED1Q8TER0 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNED1Q8TER0 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SNED1Q8TER0 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
SNED1Q8TER0 AC079178.1-201ENST00000420915 656 ntBASIC18.97■□□□□ 0.63
SNED1Q8TER0 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.97■□□□□ 0.63
SNED1Q8TER0 RN7SL769P-201ENST00000469386 295 ntBASIC18.97■□□□□ 0.63
SNED1Q8TER0 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC18.97■□□□□ 0.63
SNED1Q8TER0 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.97■□□□□ 0.63
SNED1Q8TER0 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC18.97■□□□□ 0.63
SNED1Q8TER0 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
SNED1Q8TER0 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SNED1Q8TER0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.97■□□□□ 0.63
SNED1Q8TER0 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNED1Q8TER0 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.97■□□□□ 0.63
SNED1Q8TER0 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SNED1Q8TER0 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SNED1Q8TER0 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNED1Q8TER0 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNED1Q8TER0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNED1Q8TER0 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNED1Q8TER0 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNED1Q8TER0 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNED1Q8TER0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SNED1Q8TER0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNED1Q8TER0 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNED1Q8TER0 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SNED1Q8TER0 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNED1Q8TER0 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SNED1Q8TER0 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC18.96■□□□□ 0.63
SNED1Q8TER0 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC18.96■□□□□ 0.63
SNED1Q8TER0 AC044849.1-201ENST00000519737 1188 ntBASIC18.96■□□□□ 0.63
SNED1Q8TER0 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC18.96■□□□□ 0.63
SNED1Q8TER0 RNF41-210ENST00000552244 716 ntTSL 3 BASIC18.96■□□□□ 0.63
SNED1Q8TER0 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SNED1Q8TER0 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SNED1Q8TER0 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC18.96■□□□□ 0.63
SNED1Q8TER0 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.96■□□□□ 0.63
SNED1Q8TER0 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SNED1Q8TER0 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNED1Q8TER0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.96■□□□□ 0.63
SNED1Q8TER0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNED1Q8TER0 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNED1Q8TER0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.96■□□□□ 0.63
SNED1Q8TER0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNED1Q8TER0 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNED1Q8TER0 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.96■□□□□ 0.62
SNED1Q8TER0 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.96■□□□□ 0.62
SNED1Q8TER0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.62
SNED1Q8TER0 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
SNED1Q8TER0 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNED1Q8TER0 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SNED1Q8TER0 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNED1Q8TER0 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.95■□□□□ 0.62
SNED1Q8TER0 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNED1Q8TER0 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNED1Q8TER0 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms