Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SYNPOQ8N3V7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.08■□□□□ 0.17
SYNPOQ8N3V7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SYNPOQ8N3V7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SYNPOQ8N3V7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.08■□□□□ 0.16
SYNPOQ8N3V7 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SYNPOQ8N3V7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.08■□□□□ 0.16
SYNPOQ8N3V7 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SYNPOQ8N3V7 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SYNPOQ8N3V7 C1QBPP1-201ENST00000400117 770 ntBASIC16.08■□□□□ 0.16
SYNPOQ8N3V7 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.08■□□□□ 0.16
SYNPOQ8N3V7 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.08■□□□□ 0.16
SYNPOQ8N3V7 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.08■□□□□ 0.16
SYNPOQ8N3V7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.08■□□□□ 0.16
SYNPOQ8N3V7 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.08■□□□□ 0.16
SYNPOQ8N3V7 AP001063.1-201ENST00000568332 529 ntBASIC16.08■□□□□ 0.16
SYNPOQ8N3V7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.08■□□□□ 0.16
SYNPOQ8N3V7 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
SYNPOQ8N3V7 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.08■□□□□ 0.16
SYNPOQ8N3V7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SYNPOQ8N3V7 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SYNPOQ8N3V7 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SYNPOQ8N3V7 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SYNPOQ8N3V7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SYNPOQ8N3V7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SYNPOQ8N3V7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
SYNPOQ8N3V7 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SYNPOQ8N3V7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
SYNPOQ8N3V7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SYNPOQ8N3V7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SYNPOQ8N3V7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 AC016694.1-201ENST00000434179 700 ntBASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 YBX1P6-201ENST00000442962 1002 ntBASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 AC120045.2-201ENST00000567334 178 ntBASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYNPOQ8N3V7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 AC026691.1-201ENST00000602502 2017 ntBASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 AC012441.1-201ENST00000446669 685 ntBASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 SLED1-202ENST00000512051 380 ntBASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 AL049840.4-201ENST00000602422 811 ntBASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 GPR182-203ENST00000622922 591 ntBASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms