Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SIX5Q8N196 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIX5Q8N196 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
SIX5Q8N196 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.26■□□□□ 0.19
SIX5Q8N196 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SIX5Q8N196 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.26■□□□□ 0.19
SIX5Q8N196 CALR4P-201ENST00000431943 946 ntBASIC16.26■□□□□ 0.19
SIX5Q8N196 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.26■□□□□ 0.19
SIX5Q8N196 AC012441.1-201ENST00000446669 685 ntBASIC16.26■□□□□ 0.19
SIX5Q8N196 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.26■□□□□ 0.19
SIX5Q8N196 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SIX5Q8N196 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.26■□□□□ 0.19
SIX5Q8N196 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.26■□□□□ 0.19
SIX5Q8N196 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIX5Q8N196 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.26■□□□□ 0.19
SIX5Q8N196 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.26■□□□□ 0.19
SIX5Q8N196 KRT90P-201ENST00000549264 1064 ntBASIC16.26■□□□□ 0.19
SIX5Q8N196 AC120045.2-201ENST00000567334 178 ntBASIC16.26■□□□□ 0.19
SIX5Q8N196 CLUHP6-201ENST00000580789 941 ntBASIC16.26■□□□□ 0.19
SIX5Q8N196 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.26■□□□□ 0.19
SIX5Q8N196 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIX5Q8N196 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIX5Q8N196 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.26■□□□□ 0.19
SIX5Q8N196 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SIX5Q8N196 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIX5Q8N196 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SIX5Q8N196 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.26■□□□□ 0.19
SIX5Q8N196 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIX5Q8N196 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SIX5Q8N196 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.26■□□□□ 0.19
SIX5Q8N196 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIX5Q8N196 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SIX5Q8N196 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIX5Q8N196 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SIX5Q8N196 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SIX5Q8N196 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SIX5Q8N196 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIX5Q8N196 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX5Q8N196 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.25■□□□□ 0.19
SIX5Q8N196 AL645728.1-201ENST00000366221 2101 ntBASIC16.25■□□□□ 0.19
SIX5Q8N196 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX5Q8N196 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX5Q8N196 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.25■□□□□ 0.19
SIX5Q8N196 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SIX5Q8N196 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SIX5Q8N196 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX5Q8N196 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX5Q8N196 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.25■□□□□ 0.19
SIX5Q8N196 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SIX5Q8N196 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX5Q8N196 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.25■□□□□ 0.19
SIX5Q8N196 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX5Q8N196 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX5Q8N196 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SIX5Q8N196 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SIX5Q8N196 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SIX5Q8N196 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SIX5Q8N196 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX5Q8N196 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SIX5Q8N196 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SIX5Q8N196 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX5Q8N196 AZGP1P1-201ENST00000411909 902 ntBASIC16.25■□□□□ 0.19
SIX5Q8N196 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.25■□□□□ 0.19
SIX5Q8N196 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.25■□□□□ 0.19
SIX5Q8N196 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.25■□□□□ 0.19
SIX5Q8N196 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SIX5Q8N196 FAM86HP-204ENST00000513466 959 ntBASIC16.25■□□□□ 0.19
SIX5Q8N196 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.25■□□□□ 0.19
SIX5Q8N196 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.25■□□□□ 0.19
SIX5Q8N196 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.25■□□□□ 0.19
SIX5Q8N196 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX5Q8N196 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.25■□□□□ 0.19
SIX5Q8N196 AL049840.4-201ENST00000602422 811 ntBASIC16.25■□□□□ 0.19
SIX5Q8N196 AC008687.7-202ENST00000637404 953 ntBASIC16.25■□□□□ 0.19
SIX5Q8N196 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX5Q8N196 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX5Q8N196 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX5Q8N196 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.25■□□□□ 0.19
SIX5Q8N196 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX5Q8N196 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX5Q8N196 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
SIX5Q8N196 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.25■□□□□ 0.19
SIX5Q8N196 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SIX5Q8N196 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX5Q8N196 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.25■□□□□ 0.19
SIX5Q8N196 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SIX5Q8N196 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SIX5Q8N196 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.25■□□□□ 0.19
SIX5Q8N196 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX5Q8N196 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
SIX5Q8N196 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.25■□□□□ 0.19
SIX5Q8N196 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX5Q8N196 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SIX5Q8N196 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX5Q8N196 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SIX5Q8N196 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.24■□□□□ 0.19
SIX5Q8N196 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIX5Q8N196 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SIX5Q8N196 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SIX5Q8N196 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms