Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 SPDYE7P-202ENST00000420373 878 ntBASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 MTND6P24-201ENST00000440466 518 ntBASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 RN7SL828P-201ENST00000607615 303 ntBASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC116Q8IYX3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC116Q8IYX3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CCDC116Q8IYX3 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC116Q8IYX3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15□□□□□ -0.01
CCDC116Q8IYX3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC116Q8IYX3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15□□□□□ -0.01
CCDC116Q8IYX3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15□□□□□ -0.01
CCDC116Q8IYX3 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC116Q8IYX3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15□□□□□ -0.01
CCDC116Q8IYX3 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15□□□□□ -0.01
CCDC116Q8IYX3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC116Q8IYX3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15□□□□□ -0.01
CCDC116Q8IYX3 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC116Q8IYX3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC116Q8IYX3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15□□□□□ -0.01
CCDC116Q8IYX3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC116Q8IYX3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC116Q8IYX3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC116Q8IYX3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC116Q8IYX3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC116Q8IYX3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC116Q8IYX3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC116Q8IYX3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC116Q8IYX3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CCDC116Q8IYX3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC116Q8IYX3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15□□□□□ -0.01
CCDC116Q8IYX3 HNRNPFP1-201ENST00000391730 1133 ntBASIC15□□□□□ -0.01
CCDC116Q8IYX3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
CCDC116Q8IYX3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC116Q8IYX3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15□□□□□ -0.01
CCDC116Q8IYX3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15□□□□□ -0.01
CCDC116Q8IYX3 PHKG1P2-201ENST00000457537 863 ntBASIC15□□□□□ -0.01
CCDC116Q8IYX3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC116Q8IYX3 HLA-J-203ENST00000494367 1087 ntBASIC15□□□□□ -0.01
CCDC116Q8IYX3 AC109322.1-201ENST00000524499 1264 ntBASIC15□□□□□ -0.01
CCDC116Q8IYX3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
CCDC116Q8IYX3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
CCDC116Q8IYX3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15□□□□□ -0.01
CCDC116Q8IYX3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
CCDC116Q8IYX3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15□□□□□ -0.01
CCDC116Q8IYX3 AL450472.2-201ENST00000603663 1156 ntBASIC15□□□□□ -0.01
CCDC116Q8IYX3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC116Q8IYX3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC116Q8IYX3 AC007967.4-201ENST00000614700 386 ntBASIC15□□□□□ -0.01
CCDC116Q8IYX3 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15□□□□□ -0.01
CCDC116Q8IYX3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15□□□□□ -0.01
CCDC116Q8IYX3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC116Q8IYX3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC116Q8IYX3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
CCDC116Q8IYX3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC116Q8IYX3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CCDC116Q8IYX3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC116Q8IYX3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC116Q8IYX3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
CCDC116Q8IYX3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CCDC116Q8IYX3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CCDC116Q8IYX3 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC116Q8IYX3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CCDC116Q8IYX3 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CCDC116Q8IYX3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CCDC116Q8IYX3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 AL139400.1-201ENST00000366220 510 ntBASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms