Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 WASH6P-202ENST00000359512 1437 ntBASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TRIM42Q8IWZ5 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TRIM42Q8IWZ5 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TRIM42Q8IWZ5 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM42Q8IWZ5 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM42Q8IWZ5 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM42Q8IWZ5 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM42Q8IWZ5 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM42Q8IWZ5 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM42Q8IWZ5 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.93■□□□□ 0.14
TRIM42Q8IWZ5 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM42Q8IWZ5 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM42Q8IWZ5 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM42Q8IWZ5 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM42Q8IWZ5 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.93■□□□□ 0.14
TRIM42Q8IWZ5 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM42Q8IWZ5 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.93■□□□□ 0.14
TRIM42Q8IWZ5 FGFR3P6-201ENST00000457012 610 ntBASIC15.93■□□□□ 0.14
TRIM42Q8IWZ5 AC008667.4-201ENST00000607370 168 ntBASIC15.93■□□□□ 0.14
TRIM42Q8IWZ5 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM42Q8IWZ5 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM42Q8IWZ5 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM42Q8IWZ5 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.93■□□□□ 0.14
TRIM42Q8IWZ5 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM42Q8IWZ5 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TRIM42Q8IWZ5 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TRIM42Q8IWZ5 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.93■□□□□ 0.14
TRIM42Q8IWZ5 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM42Q8IWZ5 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM42Q8IWZ5 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 PID1-202ENST00000392054 2745 ntTSL 2 BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 AC013726.1-201ENST00000563747 2285 ntBASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 AC126365.1-201ENST00000578585 1514 ntBASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 CICP23-201ENST00000605013 2741 ntBASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 MROH4P-201ENST00000431302 1578 ntBASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TRIM42Q8IWZ5 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM42Q8IWZ5 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.91■□□□□ 0.14
TRIM42Q8IWZ5 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM42Q8IWZ5 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TRIM42Q8IWZ5 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.91■□□□□ 0.14
TRIM42Q8IWZ5 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TRIM42Q8IWZ5 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM42Q8IWZ5 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TRIM42Q8IWZ5 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC15.91■□□□□ 0.14
TRIM42Q8IWZ5 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
TRIM42Q8IWZ5 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.91■□□□□ 0.14
TRIM42Q8IWZ5 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.91■□□□□ 0.14
TRIM42Q8IWZ5 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TRIM42Q8IWZ5 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.91■□□□□ 0.14
TRIM42Q8IWZ5 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.91■□□□□ 0.14
TRIM42Q8IWZ5 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM42Q8IWZ5 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms