Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB43Q86YS6 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB43Q86YS6 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
RAB43Q86YS6 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB43Q86YS6 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
RAB43Q86YS6 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RAB43Q86YS6 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RAB43Q86YS6 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB43Q86YS6 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB43Q86YS6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RAB43Q86YS6 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB43Q86YS6 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB43Q86YS6 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB43Q86YS6 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB43Q86YS6 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB43Q86YS6 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB43Q86YS6 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB43Q86YS6 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB43Q86YS6 RPL37AP1-201ENST00000412502 279 ntBASIC15.25■□□□□ 0.03
RAB43Q86YS6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB43Q86YS6 AC009477.1-201ENST00000452936 217 ntBASIC15.25■□□□□ 0.03
RAB43Q86YS6 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB43Q86YS6 RN7SL618P-201ENST00000477850 296 ntBASIC15.25■□□□□ 0.03
RAB43Q86YS6 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB43Q86YS6 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB43Q86YS6 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB43Q86YS6 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB43Q86YS6 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB43Q86YS6 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB43Q86YS6 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB43Q86YS6 GPAA1P2-202ENST00000606848 1787 ntBASIC15.25■□□□□ 0.03
RAB43Q86YS6 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB43Q86YS6 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB43Q86YS6 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB43Q86YS6 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
RAB43Q86YS6 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB43Q86YS6 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB43Q86YS6 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB43Q86YS6 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB43Q86YS6 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB43Q86YS6 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB43Q86YS6 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB43Q86YS6 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB43Q86YS6 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB43Q86YS6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB43Q86YS6 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB43Q86YS6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB43Q86YS6 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RAB43Q86YS6 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB43Q86YS6 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB43Q86YS6 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB43Q86YS6 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB43Q86YS6 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB43Q86YS6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB43Q86YS6 RNF216P1-203ENST00000404404 2427 ntBASIC15.24■□□□□ 0.03
RAB43Q86YS6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB43Q86YS6 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.24■□□□□ 0.03
RAB43Q86YS6 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RAB43Q86YS6 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB43Q86YS6 AL512652.2-201ENST00000625156 1716 ntBASIC15.24■□□□□ 0.03
RAB43Q86YS6 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
RAB43Q86YS6 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB43Q86YS6 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB43Q86YS6 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RAB43Q86YS6 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB43Q86YS6 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB43Q86YS6 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB43Q86YS6 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB43Q86YS6 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB43Q86YS6 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB43Q86YS6 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.24■□□□□ 0.03
RAB43Q86YS6 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB43Q86YS6 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB43Q86YS6 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB43Q86YS6 HLA-J-202ENST00000469281 1241 ntBASIC15.24■□□□□ 0.03
RAB43Q86YS6 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB43Q86YS6 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.24■□□□□ 0.03
RAB43Q86YS6 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB43Q86YS6 AL662799.1-202ENST00000614205 422 ntBASIC15.24■□□□□ 0.03
RAB43Q86YS6 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
RAB43Q86YS6 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.24■□□□□ 0.03
RAB43Q86YS6 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB43Q86YS6 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB43Q86YS6 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB43Q86YS6 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB43Q86YS6 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RAB43Q86YS6 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB43Q86YS6 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB43Q86YS6 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB43Q86YS6 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RAB43Q86YS6 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RAB43Q86YS6 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB43Q86YS6 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB43Q86YS6 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB43Q86YS6 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB43Q86YS6 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB43Q86YS6 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB43Q86YS6 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB43Q86YS6 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB43Q86YS6 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms