Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
LRRC28Q86X40 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
LRRC28Q86X40 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.2□□□□□ -0.14
LRRC28Q86X40 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRC28Q86X40 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRC28Q86X40 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRC28Q86X40 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.2□□□□□ -0.14
LRRC28Q86X40 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRC28Q86X40 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRC28Q86X40 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRC28Q86X40 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRC28Q86X40 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.2□□□□□ -0.14
LRRC28Q86X40 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LRRC28Q86X40 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.2□□□□□ -0.14
LRRC28Q86X40 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
LRRC28Q86X40 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LRRC28Q86X40 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRC28Q86X40 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.2□□□□□ -0.14
LRRC28Q86X40 OR2I1P-209ENST00000641730 5365 ntBASIC14.2□□□□□ -0.14
LRRC28Q86X40 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LRRC28Q86X40 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRC28Q86X40 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRC28Q86X40 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.2□□□□□ -0.14
LRRC28Q86X40 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LRRC28Q86X40 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LRRC28Q86X40 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRC28Q86X40 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
LRRC28Q86X40 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LRRC28Q86X40 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.2□□□□□ -0.14
LRRC28Q86X40 RPSAP43-201ENST00000402237 625 ntBASIC14.2□□□□□ -0.14
LRRC28Q86X40 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRC28Q86X40 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
LRRC28Q86X40 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.2□□□□□ -0.14
LRRC28Q86X40 AL513480.1-201ENST00000451731 511 ntBASIC14.2□□□□□ -0.14
LRRC28Q86X40 AC112482.1-201ENST00000492080 688 ntBASIC14.2□□□□□ -0.14
LRRC28Q86X40 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.2□□□□□ -0.14
LRRC28Q86X40 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LRRC28Q86X40 AC107918.2-201ENST00000530817 355 ntBASIC14.2□□□□□ -0.14
LRRC28Q86X40 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.2□□□□□ -0.14
LRRC28Q86X40 PDPK2P-202ENST00000562415 1191 ntBASIC14.2□□□□□ -0.14
LRRC28Q86X40 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRC28Q86X40 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRC28Q86X40 AL513190.1-201ENST00000621254 727 ntBASIC14.2□□□□□ -0.14
LRRC28Q86X40 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.2□□□□□ -0.14
LRRC28Q86X40 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.2□□□□□ -0.14
LRRC28Q86X40 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRC28Q86X40 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRC28Q86X40 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LRRC28Q86X40 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRC28Q86X40 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.2□□□□□ -0.14
LRRC28Q86X40 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
LRRC28Q86X40 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.2□□□□□ -0.14
LRRC28Q86X40 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LRRC28Q86X40 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.2□□□□□ -0.14
LRRC28Q86X40 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRC28Q86X40 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRC28Q86X40 AC007191.1-201ENST00000623179 2995 ntBASIC14.2□□□□□ -0.14
LRRC28Q86X40 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRC28Q86X40 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LRRC28Q86X40 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LRRC28Q86X40 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRC28Q86X40 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LRRC28Q86X40 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRC28Q86X40 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRC28Q86X40 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LRRC28Q86X40 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRC28Q86X40 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRC28Q86X40 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
LRRC28Q86X40 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.2□□□□□ -0.14
LRRC28Q86X40 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.2□□□□□ -0.14
LRRC28Q86X40 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LRRC28Q86X40 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRRC28Q86X40 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.19□□□□□ -0.14
LRRC28Q86X40 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRC28Q86X40 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
LRRC28Q86X40 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LRRC28Q86X40 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRRC28Q86X40 AC131009.4-201ENST00000624048 1740 ntBASIC14.19□□□□□ -0.14
LRRC28Q86X40 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LRRC28Q86X40 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRRC28Q86X40 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
LRRC28Q86X40 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRC28Q86X40 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRC28Q86X40 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRC28Q86X40 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LRRC28Q86X40 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRC28Q86X40 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.19□□□□□ -0.14
LRRC28Q86X40 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.19□□□□□ -0.14
LRRC28Q86X40 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRRC28Q86X40 AC074386.1-202ENST00000463561 864 ntBASIC14.19□□□□□ -0.14
LRRC28Q86X40 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.19□□□□□ -0.14
LRRC28Q86X40 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.19□□□□□ -0.14
LRRC28Q86X40 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.19□□□□□ -0.14
LRRC28Q86X40 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.19□□□□□ -0.14
LRRC28Q86X40 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
LRRC28Q86X40 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.19□□□□□ -0.14
LRRC28Q86X40 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.19□□□□□ -0.14
LRRC28Q86X40 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.19□□□□□ -0.14
LRRC28Q86X40 AC091167.2-201ENST00000579581 588 ntBASIC14.19□□□□□ -0.14
LRRC28Q86X40 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms