Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 AC126177.1-201ENST00000547829 2218 ntBASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 AC241585.1-201ENST00000433527 519 ntBASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 PHKG1P2-201ENST00000457537 863 ntBASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 SERBP1P3-201ENST00000459980 809 ntBASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 AL033527.5-202ENST00000641632 1098 ntBASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 NFIC-211ENST00000641145 8399 ntBASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.97■□□□□ 0.15
LYSMD3Q7Z3D4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 FO393414.2-201ENST00000405153 598 ntBASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 TSSK5P-201ENST00000423978 907 ntBASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 SPCS2P1-201ENST00000561636 679 ntBASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 AL096865.1-201ENST00000606796 927 ntBASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 AC099063.4-201ENST00000641099 1602 ntBASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD3Q7Z3D4 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.14
LYSMD3Q7Z3D4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
LYSMD3Q7Z3D4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms