Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF43Q68DV7 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF43Q68DV7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF43Q68DV7 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF43Q68DV7 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF43Q68DV7 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF43Q68DV7 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF43Q68DV7 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF43Q68DV7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RNF43Q68DV7 AC100757.3-201ENST00000622361 1406 ntBASIC16.7■□□□□ 0.26
RNF43Q68DV7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF43Q68DV7 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF43Q68DV7 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF43Q68DV7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF43Q68DV7 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.69■□□□□ 0.26
RNF43Q68DV7 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RNF43Q68DV7 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.69■□□□□ 0.26
RNF43Q68DV7 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF43Q68DV7 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF43Q68DV7 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
RNF43Q68DV7 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF43Q68DV7 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RNF43Q68DV7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF43Q68DV7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF43Q68DV7 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF43Q68DV7 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.69■□□□□ 0.26
RNF43Q68DV7 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF43Q68DV7 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF43Q68DV7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF43Q68DV7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF43Q68DV7 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.69■□□□□ 0.26
RNF43Q68DV7 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.69■□□□□ 0.26
RNF43Q68DV7 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.69■□□□□ 0.26
RNF43Q68DV7 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.69■□□□□ 0.26
RNF43Q68DV7 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF43Q68DV7 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
RNF43Q68DV7 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
RNF43Q68DV7 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF43Q68DV7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RNF43Q68DV7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF43Q68DV7 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF43Q68DV7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF43Q68DV7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RNF43Q68DV7 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF43Q68DV7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF43Q68DV7 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RNF43Q68DV7 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF43Q68DV7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF43Q68DV7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF43Q68DV7 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF43Q68DV7 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF43Q68DV7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF43Q68DV7 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF43Q68DV7 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF43Q68DV7 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF43Q68DV7 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RNF43Q68DV7 U82695.1-201ENST00000635752 1889 ntBASIC16.68■□□□□ 0.26
RNF43Q68DV7 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF43Q68DV7 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RNF43Q68DV7 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF43Q68DV7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF43Q68DV7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF43Q68DV7 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF43Q68DV7 MRPS18AP1-201ENST00000414458 589 ntBASIC16.68■□□□□ 0.26
RNF43Q68DV7 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF43Q68DV7 ARSEP1-201ENST00000420443 635 ntBASIC16.68■□□□□ 0.26
RNF43Q68DV7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
RNF43Q68DV7 AC009477.1-201ENST00000452936 217 ntBASIC16.68■□□□□ 0.26
RNF43Q68DV7 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.68■□□□□ 0.26
RNF43Q68DV7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF43Q68DV7 ZNF890P-202ENST00000530367 1156 ntBASIC16.68■□□□□ 0.26
RNF43Q68DV7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF43Q68DV7 MIR4321-201ENST00000592276 80 ntBASIC16.68■□□□□ 0.26
RNF43Q68DV7 AL365330.1-201ENST00000607459 531 ntBASIC16.68■□□□□ 0.26
RNF43Q68DV7 TEX28P1-201ENST00000613479 1221 ntBASIC16.68■□□□□ 0.26
RNF43Q68DV7 TEX28P2-201ENST00000617764 1221 ntBASIC16.68■□□□□ 0.26
RNF43Q68DV7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF43Q68DV7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF43Q68DV7 CU639417.3-201ENST00000624240 1404 ntBASIC16.68■□□□□ 0.26
RNF43Q68DV7 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF43Q68DV7 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
RNF43Q68DV7 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF43Q68DV7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RNF43Q68DV7 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF43Q68DV7 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF43Q68DV7 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF43Q68DV7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF43Q68DV7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF43Q68DV7 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF43Q68DV7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF43Q68DV7 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RNF43Q68DV7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF43Q68DV7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RNF43Q68DV7 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF43Q68DV7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.67■□□□□ 0.26
RNF43Q68DV7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF43Q68DV7 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.67■□□□□ 0.26
RNF43Q68DV7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF43Q68DV7 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF43Q68DV7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms