Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 POU5F1P6-201ENST00000466990 990 ntBASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 LINC02560-201ENST00000596379 459 ntBASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 AP001059.3-201ENST00000619053 235 ntBASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 AC008761.3-201ENST00000624803 892 ntBASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 AC144831.1-201ENST00000573312 2656 ntBASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 AL512652.2-201ENST00000625156 1716 ntBASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.01□□□□□ -0.17
CHRFAM7AQ494W8 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 AP002414.2-201ENST00000591780 3365 ntBASIC14□□□□□ -0.17
CHRFAM7AQ494W8 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 KRT8P39-201ENST00000396270 1433 ntBASIC14□□□□□ -0.17
CHRFAM7AQ494W8 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 AL590787.1-201ENST00000568856 1315 ntBASIC14□□□□□ -0.17
CHRFAM7AQ494W8 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 AL359881.2-201ENST00000602973 570 ntBASIC14□□□□□ -0.17
CHRFAM7AQ494W8 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 PRAL-201ENST00000624952 3286 ntBASIC14□□□□□ -0.17
CHRFAM7AQ494W8 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 AP005117.1-202ENST00000581724 1908 ntBASIC14□□□□□ -0.17
CHRFAM7AQ494W8 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHRFAM7AQ494W8 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHRFAM7AQ494W8 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHRFAM7AQ494W8 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.99□□□□□ -0.17
CHRFAM7AQ494W8 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.99□□□□□ -0.17
CHRFAM7AQ494W8 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHRFAM7AQ494W8 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.99□□□□□ -0.17
CHRFAM7AQ494W8 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms