Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.24□□□□□ -0.13
SCN1BQ07699 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.24□□□□□ -0.13
SCN1BQ07699 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.24□□□□□ -0.13
SCN1BQ07699 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.24□□□□□ -0.13
SCN1BQ07699 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.24□□□□□ -0.13
SCN1BQ07699 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.24□□□□□ -0.13
SCN1BQ07699 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.24□□□□□ -0.13
SCN1BQ07699 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SCN1BQ07699 REXO1L6P-202ENST00000619970 1078 ntBASIC14.24□□□□□ -0.13
SCN1BQ07699 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.24□□□□□ -0.13
SCN1BQ07699 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SCN1BQ07699 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCN1BQ07699 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCN1BQ07699 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SCN1BQ07699 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCN1BQ07699 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SCN1BQ07699 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
SCN1BQ07699 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCN1BQ07699 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCN1BQ07699 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCN1BQ07699 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCN1BQ07699 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.24□□□□□ -0.13
SCN1BQ07699 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.24□□□□□ -0.13
SCN1BQ07699 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.24□□□□□ -0.13
SCN1BQ07699 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.24□□□□□ -0.13
SCN1BQ07699 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCN1BQ07699 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SCN1BQ07699 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCN1BQ07699 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCN1BQ07699 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SCN1BQ07699 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCN1BQ07699 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCN1BQ07699 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCN1BQ07699 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.23□□□□□ -0.13
SCN1BQ07699 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCN1BQ07699 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCN1BQ07699 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.23□□□□□ -0.13
SCN1BQ07699 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SCN1BQ07699 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SCN1BQ07699 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCN1BQ07699 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SCN1BQ07699 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SCN1BQ07699 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SCN1BQ07699 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCN1BQ07699 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.23□□□□□ -0.13
SCN1BQ07699 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SCN1BQ07699 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.23□□□□□ -0.13
SCN1BQ07699 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SCN1BQ07699 PTCHD3P3-201ENST00000403073 906 ntBASIC14.23□□□□□ -0.13
SCN1BQ07699 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.23□□□□□ -0.13
SCN1BQ07699 SAPCD2P3-201ENST00000455031 850 ntBASIC14.23□□□□□ -0.13
SCN1BQ07699 KRT18P56-201ENST00000507275 550 ntBASIC14.23□□□□□ -0.13
SCN1BQ07699 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.23□□□□□ -0.13
SCN1BQ07699 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.23□□□□□ -0.13
SCN1BQ07699 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.23□□□□□ -0.13
SCN1BQ07699 CLEC4GP1-201ENST00000596555 870 ntBASIC14.23□□□□□ -0.13
SCN1BQ07699 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.23□□□□□ -0.13
SCN1BQ07699 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SCN1BQ07699 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.23□□□□□ -0.13
SCN1BQ07699 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.23□□□□□ -0.13
SCN1BQ07699 AC005252.3-201ENST00000623855 2258 ntBASIC14.23□□□□□ -0.13
SCN1BQ07699 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCN1BQ07699 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.23□□□□□ -0.13
SCN1BQ07699 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.23□□□□□ -0.13
SCN1BQ07699 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.23□□□□□ -0.13
SCN1BQ07699 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCN1BQ07699 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCN1BQ07699 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCN1BQ07699 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.23□□□□□ -0.13
SCN1BQ07699 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.23□□□□□ -0.13
SCN1BQ07699 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SCN1BQ07699 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCN1BQ07699 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCN1BQ07699 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCN1BQ07699 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCN1BQ07699 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.23□□□□□ -0.13
SCN1BQ07699 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCN1BQ07699 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
SCN1BQ07699 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.22□□□□□ -0.13
SCN1BQ07699 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCN1BQ07699 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCN1BQ07699 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SCN1BQ07699 AC091951.1-201ENST00000512854 2465 ntBASIC14.22□□□□□ -0.13
SCN1BQ07699 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCN1BQ07699 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SCN1BQ07699 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCN1BQ07699 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCN1BQ07699 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.22□□□□□ -0.13
SCN1BQ07699 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SCN1BQ07699 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCN1BQ07699 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCN1BQ07699 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SCN1BQ07699 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.22□□□□□ -0.13
SCN1BQ07699 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SCN1BQ07699 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.22□□□□□ -0.13
SCN1BQ07699 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SCN1BQ07699 AF238378.1-201ENST00000526806 358 ntBASIC14.22□□□□□ -0.13
SCN1BQ07699 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SCN1BQ07699 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.22□□□□□ -0.13
SCN1BQ07699 AC021087.4-201ENST00000563761 564 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms