Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 AC023908.3-201ENST00000564211 3047 ntBASIC12.25□□□□□ -0.45
HIST1H1AQ02539 AL592424.1-201ENST00000563624 1536 ntBASIC12.25□□□□□ -0.45
HIST1H1AQ02539 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 KRT18P34-201ENST00000488218 1270 ntBASIC12.24□□□□□ -0.45
HIST1H1AQ02539 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 Z83851.2-201ENST00000609564 659 ntBASIC12.24□□□□□ -0.45
HIST1H1AQ02539 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
HIST1H1AQ02539 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H1AQ02539 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
HIST1H1AQ02539 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.23□□□□□ -0.45
HIST1H1AQ02539 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H1AQ02539 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H1AQ02539 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
HIST1H1AQ02539 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
HIST1H1AQ02539 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
HIST1H1AQ02539 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H1AQ02539 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H1AQ02539 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H1AQ02539 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H1AQ02539 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H1AQ02539 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
HIST1H1AQ02539 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H1AQ02539 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H1AQ02539 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms