Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
YBX1P67809 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
YBX1P67809 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
YBX1P67809 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.48■□□□□ 0.07
YBX1P67809 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
YBX1P67809 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
YBX1P67809 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
YBX1P67809 CICP24-201ENST00000605464 2705 ntBASIC15.48■□□□□ 0.07
YBX1P67809 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
YBX1P67809 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
YBX1P67809 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
YBX1P67809 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
YBX1P67809 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
YBX1P67809 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
YBX1P67809 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.48■□□□□ 0.07
YBX1P67809 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
YBX1P67809 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
YBX1P67809 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.48■□□□□ 0.07
YBX1P67809 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.48■□□□□ 0.07
YBX1P67809 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
YBX1P67809 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.48■□□□□ 0.07
YBX1P67809 AL079307.3-201ENST00000556114 283 ntBASIC15.48■□□□□ 0.07
YBX1P67809 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.48■□□□□ 0.07
YBX1P67809 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
YBX1P67809 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
YBX1P67809 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
YBX1P67809 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
YBX1P67809 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
YBX1P67809 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
YBX1P67809 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
YBX1P67809 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
YBX1P67809 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
YBX1P67809 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
YBX1P67809 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.48■□□□□ 0.07
YBX1P67809 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.48■□□□□ 0.07
YBX1P67809 AC091951.1-201ENST00000512854 2465 ntBASIC15.48■□□□□ 0.07
YBX1P67809 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.48■□□□□ 0.07
YBX1P67809 AC138035.3-201ENST00000622706 2791 ntBASIC15.47■□□□□ 0.07
YBX1P67809 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
YBX1P67809 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
YBX1P67809 AL109954.1-202ENST00000564051 2148 ntBASIC15.47■□□□□ 0.07
YBX1P67809 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
YBX1P67809 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
YBX1P67809 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
YBX1P67809 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.47■□□□□ 0.07
YBX1P67809 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
YBX1P67809 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.47■□□□□ 0.07
YBX1P67809 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.47■□□□□ 0.07
YBX1P67809 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
YBX1P67809 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
YBX1P67809 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
YBX1P67809 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
YBX1P67809 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
YBX1P67809 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
YBX1P67809 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
YBX1P67809 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
YBX1P67809 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
YBX1P67809 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
YBX1P67809 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
YBX1P67809 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.47■□□□□ 0.07
YBX1P67809 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.47■□□□□ 0.07
YBX1P67809 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.47■□□□□ 0.07
YBX1P67809 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
YBX1P67809 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
YBX1P67809 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
YBX1P67809 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
YBX1P67809 AC069120.2-201ENST00000524091 540 ntBASIC15.47■□□□□ 0.07
YBX1P67809 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.47■□□□□ 0.07
YBX1P67809 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.47■□□□□ 0.07
YBX1P67809 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.47■□□□□ 0.07
YBX1P67809 AL589739.1-201ENST00000607720 493 ntBASIC15.47■□□□□ 0.07
YBX1P67809 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
YBX1P67809 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.47■□□□□ 0.07
YBX1P67809 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
YBX1P67809 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
YBX1P67809 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
YBX1P67809 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
YBX1P67809 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
YBX1P67809 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
YBX1P67809 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.47■□□□□ 0.07
YBX1P67809 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
YBX1P67809 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
YBX1P67809 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
YBX1P67809 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.47■□□□□ 0.07
YBX1P67809 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
YBX1P67809 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
YBX1P67809 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.47■□□□□ 0.07
YBX1P67809 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
YBX1P67809 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
YBX1P67809 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.47■□□□□ 0.07
YBX1P67809 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
YBX1P67809 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
YBX1P67809 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
YBX1P67809 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
YBX1P67809 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.46■□□□□ 0.07
YBX1P67809 AC009090.5-201ENST00000624886 2285 ntBASIC15.46■□□□□ 0.07
YBX1P67809 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
YBX1P67809 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
YBX1P67809 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.46■□□□□ 0.07
YBX1P67809 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms