Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S2P59780 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S2P59780 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.7□□□□□ -0.22
AP3S2P59780 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S2P59780 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S2P59780 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC13.7□□□□□ -0.22
AP3S2P59780 AC092647.4-201ENST00000457211 535 ntBASIC13.7□□□□□ -0.22
AP3S2P59780 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S2P59780 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.7□□□□□ -0.22
AP3S2P59780 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
AP3S2P59780 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.7□□□□□ -0.22
AP3S2P59780 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.7□□□□□ -0.22
AP3S2P59780 AC011498.5-201ENST00000592027 486 ntBASIC13.7□□□□□ -0.22
AP3S2P59780 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
AP3S2P59780 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.7□□□□□ -0.22
AP3S2P59780 AL139424.1-201ENST00000607572 797 ntBASIC13.7□□□□□ -0.22
AP3S2P59780 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.7□□□□□ -0.22
AP3S2P59780 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.7□□□□□ -0.22
AP3S2P59780 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
AP3S2P59780 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC13.7□□□□□ -0.22
AP3S2P59780 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
AP3S2P59780 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S2P59780 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.7□□□□□ -0.22
AP3S2P59780 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S2P59780 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S2P59780 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.7□□□□□ -0.22
AP3S2P59780 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.7□□□□□ -0.22
AP3S2P59780 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.7□□□□□ -0.22
AP3S2P59780 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S2P59780 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S2P59780 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S2P59780 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.7□□□□□ -0.22
AP3S2P59780 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S2P59780 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
AP3S2P59780 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S2P59780 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.7□□□□□ -0.22
AP3S2P59780 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S2P59780 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S2P59780 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
AP3S2P59780 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S2P59780 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S2P59780 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
AP3S2P59780 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.69□□□□□ -0.22
AP3S2P59780 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S2P59780 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.69□□□□□ -0.22
AP3S2P59780 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S2P59780 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S2P59780 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.69□□□□□ -0.22
AP3S2P59780 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.69□□□□□ -0.22
AP3S2P59780 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S2P59780 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.69□□□□□ -0.22
AP3S2P59780 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S2P59780 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.69□□□□□ -0.22
AP3S2P59780 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC13.69□□□□□ -0.22
AP3S2P59780 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC13.69□□□□□ -0.22
AP3S2P59780 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S2P59780 SPDYE13P-201ENST00000445314 798 ntBASIC13.69□□□□□ -0.22
AP3S2P59780 AC091607.1-201ENST00000490318 1060 ntBASIC13.69□□□□□ -0.22
AP3S2P59780 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S2P59780 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.69□□□□□ -0.22
AP3S2P59780 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S2P59780 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.69□□□□□ -0.22
AP3S2P59780 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
AP3S2P59780 Z69720.1-201ENST00000601483 472 ntBASIC13.69□□□□□ -0.22
AP3S2P59780 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S2P59780 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.69□□□□□ -0.22
AP3S2P59780 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S2P59780 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S2P59780 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.69□□□□□ -0.22
AP3S2P59780 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S2P59780 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S2P59780 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S2P59780 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
AP3S2P59780 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S2P59780 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.69□□□□□ -0.22
AP3S2P59780 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.69□□□□□ -0.22
AP3S2P59780 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
AP3S2P59780 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S2P59780 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
AP3S2P59780 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.69□□□□□ -0.22
AP3S2P59780 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
AP3S2P59780 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S2P59780 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.69□□□□□ -0.22
AP3S2P59780 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S2P59780 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S2P59780 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
AP3S2P59780 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S2P59780 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.68□□□□□ -0.22
AP3S2P59780 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
AP3S2P59780 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.68□□□□□ -0.22
AP3S2P59780 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
AP3S2P59780 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S2P59780 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
AP3S2P59780 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.68□□□□□ -0.22
AP3S2P59780 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S2P59780 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S2P59780 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S2P59780 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S2P59780 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.68□□□□□ -0.22
AP3S2P59780 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms