Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
VSX2P58304 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VSX2P58304 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.24■□□□□ 0.03
VSX2P58304 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VSX2P58304 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VSX2P58304 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VSX2P58304 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.24■□□□□ 0.03
VSX2P58304 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VSX2P58304 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VSX2P58304 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VSX2P58304 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.23■□□□□ 0.03
VSX2P58304 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VSX2P58304 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.23■□□□□ 0.03
VSX2P58304 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
VSX2P58304 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VSX2P58304 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VSX2P58304 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
VSX2P58304 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
VSX2P58304 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VSX2P58304 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
VSX2P58304 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VSX2P58304 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.23■□□□□ 0.03
VSX2P58304 EEF1DP4-201ENST00000446006 880 ntBASIC15.23■□□□□ 0.03
VSX2P58304 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.23■□□□□ 0.03
VSX2P58304 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VSX2P58304 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.23■□□□□ 0.03
VSX2P58304 SERBP1P5-201ENST00000510079 1181 ntBASIC15.23■□□□□ 0.03
VSX2P58304 SDHAP3-202ENST00000515467 728 ntBASIC15.23■□□□□ 0.03
VSX2P58304 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.23■□□□□ 0.03
VSX2P58304 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.23■□□□□ 0.03
VSX2P58304 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.23■□□□□ 0.03
VSX2P58304 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.23■□□□□ 0.03
VSX2P58304 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
VSX2P58304 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.23■□□□□ 0.03
VSX2P58304 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
VSX2P58304 AC004840.1-201ENST00000636359 365 ntBASIC15.23■□□□□ 0.03
VSX2P58304 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VSX2P58304 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VSX2P58304 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VSX2P58304 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
VSX2P58304 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
VSX2P58304 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.23■□□□□ 0.03
VSX2P58304 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.23■□□□□ 0.03
VSX2P58304 AP003680.1-201ENST00000598970 3660 ntBASIC15.23■□□□□ 0.03
VSX2P58304 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.23■□□□□ 0.03
VSX2P58304 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
VSX2P58304 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VSX2P58304 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.23■□□□□ 0.03
VSX2P58304 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VSX2P58304 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.22■□□□□ 0.03
VSX2P58304 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.22■□□□□ 0.03
VSX2P58304 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
VSX2P58304 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
VSX2P58304 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VSX2P58304 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VSX2P58304 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.22■□□□□ 0.03
VSX2P58304 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VSX2P58304 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.22■□□□□ 0.03
VSX2P58304 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VSX2P58304 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
VSX2P58304 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VSX2P58304 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VSX2P58304 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
VSX2P58304 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.22■□□□□ 0.03
VSX2P58304 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VSX2P58304 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.22■□□□□ 0.03
VSX2P58304 FAM207CP-201ENST00000443486 507 ntBASIC15.22■□□□□ 0.03
VSX2P58304 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.22■□□□□ 0.03
VSX2P58304 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.22■□□□□ 0.03
VSX2P58304 ZNF890P-202ENST00000530367 1156 ntBASIC15.22■□□□□ 0.03
VSX2P58304 AC009118.2-201ENST00000613275 655 ntBASIC15.22■□□□□ 0.03
VSX2P58304 AC008761.3-201ENST00000624803 892 ntBASIC15.22■□□□□ 0.03
VSX2P58304 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.22■□□□□ 0.03
VSX2P58304 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VSX2P58304 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VSX2P58304 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VSX2P58304 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
VSX2P58304 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VSX2P58304 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VSX2P58304 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
VSX2P58304 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
VSX2P58304 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VSX2P58304 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
VSX2P58304 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VSX2P58304 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VSX2P58304 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VSX2P58304 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
VSX2P58304 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
VSX2P58304 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
VSX2P58304 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
VSX2P58304 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.21■□□□□ 0.03
VSX2P58304 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.21■□□□□ 0.03
VSX2P58304 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
VSX2P58304 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.21■□□□□ 0.03
VSX2P58304 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VSX2P58304 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VSX2P58304 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
VSX2P58304 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
VSX2P58304 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VSX2P58304 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms