Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC20.71■□□□□ 0.91
RIPK4P57078 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC20.71■□□□□ 0.91
RIPK4P57078 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RIPK4P57078 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC20.71■□□□□ 0.91
RIPK4P57078 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIPK4P57078 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIPK4P57078 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIPK4P57078 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIPK4P57078 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIPK4P57078 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIPK4P57078 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC20.7■□□□□ 0.9
RIPK4P57078 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
RIPK4P57078 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
RIPK4P57078 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIPK4P57078 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIPK4P57078 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC20.7■□□□□ 0.9
RIPK4P57078 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIPK4P57078 CMC2-214ENST00000565925 640 ntTSL 5 BASIC20.7■□□□□ 0.9
RIPK4P57078 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC20.7■□□□□ 0.9
RIPK4P57078 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC20.7■□□□□ 0.9
RIPK4P57078 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIPK4P57078 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIPK4P57078 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RIPK4P57078 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC20.7■□□□□ 0.9
RIPK4P57078 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RIPK4P57078 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC20.7■□□□□ 0.9
RIPK4P57078 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RIPK4P57078 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
RIPK4P57078 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC20.69■□□□□ 0.9
RIPK4P57078 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RIPK4P57078 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC20.69■□□□□ 0.9
RIPK4P57078 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIPK4P57078 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIPK4P57078 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIPK4P57078 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC20.69■□□□□ 0.9
RIPK4P57078 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RIPK4P57078 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC20.69■□□□□ 0.9
RIPK4P57078 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC20.69■□□□□ 0.9
RIPK4P57078 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC20.69■□□□□ 0.9
RIPK4P57078 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RIPK4P57078 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC20.69■□□□□ 0.9
RIPK4P57078 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RIPK4P57078 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
RIPK4P57078 MIR8072-201ENST00000614241 80 ntBASIC20.69■□□□□ 0.9
RIPK4P57078 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIPK4P57078 CICP13-201ENST00000422015 2789 ntBASIC20.69■□□□□ 0.9
RIPK4P57078 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RIPK4P57078 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC20.69■□□□□ 0.9
RIPK4P57078 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
RIPK4P57078 AL391825.1-201ENST00000457671 1364 ntBASIC20.69■□□□□ 0.9
RIPK4P57078 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RIPK4P57078 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
RIPK4P57078 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIPK4P57078 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIPK4P57078 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIPK4P57078 CLK3P2-201ENST00000427566 1453 ntBASIC20.69■□□□□ 0.9
RIPK4P57078 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
RIPK4P57078 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
RIPK4P57078 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC20.68■□□□□ 0.9
RIPK4P57078 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIPK4P57078 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RIPK4P57078 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC20.68■□□□□ 0.9
RIPK4P57078 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RIPK4P57078 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
RIPK4P57078 MEP1AP4-201ENST00000423244 1087 ntBASIC20.68■□□□□ 0.9
RIPK4P57078 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RIPK4P57078 AC055876.2-201ENST00000531834 546 ntBASIC20.68■□□□□ 0.9
RIPK4P57078 TP53TG3HP-202ENST00000569755 579 ntBASIC20.68■□□□□ 0.9
RIPK4P57078 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
RIPK4P57078 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIPK4P57078 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RIPK4P57078 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RIPK4P57078 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIPK4P57078 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC20.68■□□□□ 0.9
RIPK4P57078 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIPK4P57078 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC20.68■□□□□ 0.9
RIPK4P57078 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC20.67■□□□□ 0.9
RIPK4P57078 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RIPK4P57078 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RIPK4P57078 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RIPK4P57078 AC092127.1-201ENST00000567093 3455 ntBASIC20.67■□□□□ 0.9
RIPK4P57078 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC20.67■□□□□ 0.9
RIPK4P57078 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RIPK4P57078 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RIPK4P57078 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RIPK4P57078 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RIPK4P57078 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RIPK4P57078 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RIPK4P57078 AC098850.1-201ENST00000419919 790 ntBASIC20.67■□□□□ 0.9
RIPK4P57078 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RIPK4P57078 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC20.67■□□□□ 0.9
RIPK4P57078 FADS2-205ENST00000517839 469 ntTSL 3 BASIC20.67■□□□□ 0.9
RIPK4P57078 AP005018.1-201ENST00000525475 301 ntBASIC20.67■□□□□ 0.9
RIPK4P57078 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC20.67■□□□□ 0.9
RIPK4P57078 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC20.67■□□□□ 0.9
RIPK4P57078 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC20.67■□□□□ 0.9
RIPK4P57078 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC20.67■□□□□ 0.9
RIPK4P57078 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC20.67■□□□□ 0.9
RIPK4P57078 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RIPK4P57078 AC138969.3-201ENST00000546612 1459 ntBASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms