Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN20P56880 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN20P56880 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.61□□□□□ -0.07
CLDN20P56880 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CLDN20P56880 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN20P56880 AP005117.1-202ENST00000581724 1908 ntBASIC14.61□□□□□ -0.07
CLDN20P56880 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.61□□□□□ -0.07
CLDN20P56880 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CLDN20P56880 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN20P56880 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN20P56880 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN20P56880 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CLDN20P56880 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CLDN20P56880 MIR943-201ENST00000401286 94 ntBASIC14.61□□□□□ -0.07
CLDN20P56880 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.61□□□□□ -0.07
CLDN20P56880 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.61□□□□□ -0.07
CLDN20P56880 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN20P56880 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.61□□□□□ -0.07
CLDN20P56880 AC140878.1-201ENST00000565277 250 ntBASIC14.61□□□□□ -0.07
CLDN20P56880 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.61□□□□□ -0.07
CLDN20P56880 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN20P56880 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.61□□□□□ -0.07
CLDN20P56880 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN20P56880 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN20P56880 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.61□□□□□ -0.07
CLDN20P56880 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
CLDN20P56880 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN20P56880 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.61□□□□□ -0.07
CLDN20P56880 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CLDN20P56880 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.61□□□□□ -0.07
CLDN20P56880 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN20P56880 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
CLDN20P56880 PPT1-215ENST00000641471 2368 ntBASIC14.61□□□□□ -0.07
CLDN20P56880 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN20P56880 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.61□□□□□ -0.07
CLDN20P56880 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN20P56880 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN20P56880 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CLDN20P56880 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN20P56880 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN20P56880 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.6□□□□□ -0.07
CLDN20P56880 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.6□□□□□ -0.07
CLDN20P56880 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN20P56880 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.6□□□□□ -0.07
CLDN20P56880 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.6□□□□□ -0.07
CLDN20P56880 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN20P56880 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CLDN20P56880 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN20P56880 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN20P56880 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN20P56880 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN20P56880 PKD1P5-201ENST00000532415 10291 ntBASIC14.6□□□□□ -0.07
CLDN20P56880 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
CLDN20P56880 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
CLDN20P56880 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CLDN20P56880 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.6□□□□□ -0.07
CLDN20P56880 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.6□□□□□ -0.07
CLDN20P56880 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN20P56880 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.6□□□□□ -0.07
CLDN20P56880 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN20P56880 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN20P56880 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN20P56880 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CLDN20P56880 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CLDN20P56880 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN20P56880 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.6□□□□□ -0.07
CLDN20P56880 TREML5P-201ENST00000421694 576 ntBASIC14.6□□□□□ -0.07
CLDN20P56880 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.6□□□□□ -0.07
CLDN20P56880 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN20P56880 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.6□□□□□ -0.07
CLDN20P56880 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.6□□□□□ -0.07
CLDN20P56880 BANF1P1-201ENST00000553684 263 ntBASIC14.6□□□□□ -0.07
CLDN20P56880 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN20P56880 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.6□□□□□ -0.07
CLDN20P56880 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.6□□□□□ -0.07
CLDN20P56880 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN20P56880 AL390955.2-201ENST00000603032 514 ntBASIC14.6□□□□□ -0.07
CLDN20P56880 AL365330.1-201ENST00000607459 531 ntBASIC14.6□□□□□ -0.07
CLDN20P56880 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.6□□□□□ -0.07
CLDN20P56880 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.6□□□□□ -0.07
CLDN20P56880 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN20P56880 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CLDN20P56880 AC023157.3-201ENST00000619086 2088 ntBASIC14.6□□□□□ -0.07
CLDN20P56880 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN20P56880 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN20P56880 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN20P56880 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN20P56880 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CLDN20P56880 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.6□□□□□ -0.07
CLDN20P56880 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
CLDN20P56880 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CLDN20P56880 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.6□□□□□ -0.07
CLDN20P56880 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN20P56880 FO538757.1-201ENST00000623083 1397 ntBASIC14.6□□□□□ -0.07
CLDN20P56880 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CLDN20P56880 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN20P56880 AC063926.3-201ENST00000624734 5658 ntBASIC14.59□□□□□ -0.07
CLDN20P56880 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CLDN20P56880 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.59□□□□□ -0.07
CLDN20P56880 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms