Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCKAP1LP55160 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.31■□□□□ 0.36
NCKAP1LP55160 GNAQP1-201ENST00000444815 1067 ntBASIC17.31■□□□□ 0.36
NCKAP1LP55160 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.31■□□□□ 0.36
NCKAP1LP55160 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.31■□□□□ 0.36
NCKAP1LP55160 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.31■□□□□ 0.36
NCKAP1LP55160 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.31■□□□□ 0.36
NCKAP1LP55160 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.31■□□□□ 0.36
NCKAP1LP55160 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NCKAP1LP55160 AL158212.4-201ENST00000624062 1286 ntBASIC17.31■□□□□ 0.36
NCKAP1LP55160 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.31■□□□□ 0.36
NCKAP1LP55160 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NCKAP1LP55160 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NCKAP1LP55160 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NCKAP1LP55160 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NCKAP1LP55160 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCKAP1LP55160 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NCKAP1LP55160 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCKAP1LP55160 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCKAP1LP55160 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.31■□□□□ 0.36
NCKAP1LP55160 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.3■□□□□ 0.36
NCKAP1LP55160 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
NCKAP1LP55160 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.3■□□□□ 0.36
NCKAP1LP55160 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCKAP1LP55160 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.3■□□□□ 0.36
NCKAP1LP55160 AC105250.1-201ENST00000509378 2057 ntBASIC17.3■□□□□ 0.36
NCKAP1LP55160 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCKAP1LP55160 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.3■□□□□ 0.36
NCKAP1LP55160 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NCKAP1LP55160 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.3■□□□□ 0.36
NCKAP1LP55160 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCKAP1LP55160 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
NCKAP1LP55160 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCKAP1LP55160 SPDYE19P-201ENST00000338590 713 ntBASIC17.3■□□□□ 0.36
NCKAP1LP55160 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NCKAP1LP55160 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NCKAP1LP55160 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.3■□□□□ 0.36
NCKAP1LP55160 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.3■□□□□ 0.36
NCKAP1LP55160 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.3■□□□□ 0.36
NCKAP1LP55160 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.3■□□□□ 0.36
NCKAP1LP55160 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.3■□□□□ 0.36
NCKAP1LP55160 AC023310.3-201ENST00000557027 670 ntBASIC17.3■□□□□ 0.36
NCKAP1LP55160 AC100756.1-201ENST00000562736 682 ntBASIC17.3■□□□□ 0.36
NCKAP1LP55160 AC138749.3-201ENST00000567691 622 ntBASIC17.3■□□□□ 0.36
NCKAP1LP55160 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
NCKAP1LP55160 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.3■□□□□ 0.36
NCKAP1LP55160 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.3■□□□□ 0.36
NCKAP1LP55160 AC116165.1-201ENST00000611806 668 ntBASIC17.3■□□□□ 0.36
NCKAP1LP55160 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.3■□□□□ 0.36
NCKAP1LP55160 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCKAP1LP55160 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.3■□□□□ 0.36
NCKAP1LP55160 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NCKAP1LP55160 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NCKAP1LP55160 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCKAP1LP55160 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NCKAP1LP55160 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCKAP1LP55160 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCKAP1LP55160 AC138969.3-201ENST00000546612 1459 ntBASIC17.3■□□□□ 0.36
NCKAP1LP55160 AC138932.2-201ENST00000548268 1459 ntBASIC17.3■□□□□ 0.36
NCKAP1LP55160 AC126755.4-201ENST00000549796 1459 ntBASIC17.3■□□□□ 0.36
NCKAP1LP55160 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCKAP1LP55160 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.3■□□□□ 0.36
NCKAP1LP55160 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
NCKAP1LP55160 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKAP1LP55160 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKAP1LP55160 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKAP1LP55160 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKAP1LP55160 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.29■□□□□ 0.36
NCKAP1LP55160 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
NCKAP1LP55160 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NCKAP1LP55160 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.29■□□□□ 0.36
NCKAP1LP55160 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKAP1LP55160 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NCKAP1LP55160 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKAP1LP55160 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKAP1LP55160 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NCKAP1LP55160 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
NCKAP1LP55160 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.29■□□□□ 0.36
NCKAP1LP55160 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NCKAP1LP55160 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.29■□□□□ 0.36
NCKAP1LP55160 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKAP1LP55160 AC092364.2-202ENST00000597012 1073 ntBASIC17.29■□□□□ 0.36
NCKAP1LP55160 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKAP1LP55160 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.29■□□□□ 0.36
NCKAP1LP55160 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.29■□□□□ 0.36
NCKAP1LP55160 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.29■□□□□ 0.36
NCKAP1LP55160 AC009090.5-201ENST00000624886 2285 ntBASIC17.29■□□□□ 0.36
NCKAP1LP55160 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NCKAP1LP55160 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
NCKAP1LP55160 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKAP1LP55160 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKAP1LP55160 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKAP1LP55160 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NCKAP1LP55160 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.29■□□□□ 0.36
NCKAP1LP55160 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKAP1LP55160 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKAP1LP55160 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NCKAP1LP55160 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.29■□□□□ 0.36
NCKAP1LP55160 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKAP1LP55160 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms