Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CX3CR1P49238 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CX3CR1P49238 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CX3CR1P49238 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CX3CR1P49238 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CX3CR1P49238 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CX3CR1P49238 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CX3CR1P49238 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
CX3CR1P49238 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.02□□□□□ -0.17
CX3CR1P49238 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CX3CR1P49238 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CX3CR1P49238 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CX3CR1P49238 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CX3CR1P49238 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CX3CR1P49238 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CX3CR1P49238 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CX3CR1P49238 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CX3CR1P49238 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CX3CR1P49238 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CX3CR1P49238 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CX3CR1P49238 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CX3CR1P49238 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CX3CR1P49238 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CX3CR1P49238 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CX3CR1P49238 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CX3CR1P49238 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CX3CR1P49238 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CX3CR1P49238 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.01□□□□□ -0.17
CX3CR1P49238 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CX3CR1P49238 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CX3CR1P49238 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CX3CR1P49238 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CX3CR1P49238 SPCS2P4-201ENST00000436160 681 ntBASIC14.01□□□□□ -0.17
CX3CR1P49238 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.01□□□□□ -0.17
CX3CR1P49238 AC079140.1-201ENST00000508039 487 ntBASIC14.01□□□□□ -0.17
CX3CR1P49238 KRT8P48-201ENST00000515599 1220 ntBASIC14.01□□□□□ -0.17
CX3CR1P49238 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.01□□□□□ -0.17
CX3CR1P49238 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.01□□□□□ -0.17
CX3CR1P49238 AC243562.1-201ENST00000560672 389 ntBASIC14.01□□□□□ -0.17
CX3CR1P49238 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.01□□□□□ -0.17
CX3CR1P49238 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.01□□□□□ -0.17
CX3CR1P49238 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CX3CR1P49238 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CX3CR1P49238 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.01□□□□□ -0.17
CX3CR1P49238 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CX3CR1P49238 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CX3CR1P49238 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
CX3CR1P49238 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CX3CR1P49238 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CX3CR1P49238 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
CX3CR1P49238 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.01□□□□□ -0.17
CX3CR1P49238 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CX3CR1P49238 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
CX3CR1P49238 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.01□□□□□ -0.17
CX3CR1P49238 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.01□□□□□ -0.17
CX3CR1P49238 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.01□□□□□ -0.17
CX3CR1P49238 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.01□□□□□ -0.17
CX3CR1P49238 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.01□□□□□ -0.17
CX3CR1P49238 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CX3CR1P49238 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14□□□□□ -0.17
CX3CR1P49238 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14□□□□□ -0.17
CX3CR1P49238 ZBTB45P2-201ENST00000452245 1531 ntBASIC14□□□□□ -0.17
CX3CR1P49238 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14□□□□□ -0.17
CX3CR1P49238 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CX3CR1P49238 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14□□□□□ -0.17
CX3CR1P49238 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CX3CR1P49238 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CX3CR1P49238 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CX3CR1P49238 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CX3CR1P49238 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CX3CR1P49238 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CX3CR1P49238 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CX3CR1P49238 AL691432.1-201ENST00000596308 1422 ntBASIC14□□□□□ -0.17
CX3CR1P49238 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CX3CR1P49238 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CX3CR1P49238 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14□□□□□ -0.17
CX3CR1P49238 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14□□□□□ -0.17
CX3CR1P49238 AC020658.6-201ENST00000623564 1870 ntBASIC14□□□□□ -0.17
CX3CR1P49238 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CX3CR1P49238 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CX3CR1P49238 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CX3CR1P49238 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CX3CR1P49238 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14□□□□□ -0.17
CX3CR1P49238 HLA-H-201ENST00000383620 1096 ntBASIC14□□□□□ -0.17
CX3CR1P49238 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14□□□□□ -0.17
CX3CR1P49238 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14□□□□□ -0.17
CX3CR1P49238 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CX3CR1P49238 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14□□□□□ -0.17
CX3CR1P49238 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14□□□□□ -0.17
CX3CR1P49238 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14□□□□□ -0.17
CX3CR1P49238 AP000842.3-202ENST00000569238 1080 ntBASIC14□□□□□ -0.17
CX3CR1P49238 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14□□□□□ -0.17
CX3CR1P49238 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14□□□□□ -0.17
CX3CR1P49238 C20orf181-201ENST00000623918 480 ntBASIC14□□□□□ -0.17
CX3CR1P49238 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14□□□□□ -0.17
CX3CR1P49238 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CX3CR1P49238 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CX3CR1P49238 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14□□□□□ -0.17
CX3CR1P49238 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14□□□□□ -0.17
CX3CR1P49238 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms