Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.05■□□□□ -0
CDKN2CP42773 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
CDKN2CP42773 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.05■□□□□ -0
CDKN2CP42773 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.05■□□□□ -0
CDKN2CP42773 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDKN2CP42773 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CDKN2CP42773 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.05■□□□□ -0
CDKN2CP42773 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.05■□□□□ -0
CDKN2CP42773 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.05■□□□□ -0
CDKN2CP42773 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDKN2CP42773 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
CDKN2CP42773 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CDKN2CP42773 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDKN2CP42773 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CDKN2CP42773 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CDKN2CP42773 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDKN2CP42773 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDKN2CP42773 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDKN2CP42773 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDKN2CP42773 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDKN2CP42773 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.04■□□□□ -0
CDKN2CP42773 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.04■□□□□ -0
CDKN2CP42773 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDKN2CP42773 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CDKN2CP42773 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDKN2CP42773 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDKN2CP42773 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
CDKN2CP42773 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.04■□□□□ -0
CDKN2CP42773 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CDKN2CP42773 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.04■□□□□ -0
CDKN2CP42773 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDKN2CP42773 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.04■□□□□ -0
CDKN2CP42773 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDKN2CP42773 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.04■□□□□ -0
CDKN2CP42773 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CDKN2CP42773 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CDKN2CP42773 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CDKN2CP42773 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDKN2CP42773 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CDKN2CP42773 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDKN2CP42773 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDKN2CP42773 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDKN2CP42773 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDKN2CP42773 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDKN2CP42773 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.04■□□□□ -0
CDKN2CP42773 AC004987.2-201ENST00000395959 1148 ntBASIC15.04■□□□□ -0
CDKN2CP42773 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.04■□□□□ -0
CDKN2CP42773 AC023274.1-201ENST00000418278 595 ntBASIC15.04■□□□□ -0
CDKN2CP42773 FAM58CP-201ENST00000435741 640 ntBASIC15.04■□□□□ -0
CDKN2CP42773 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.04■□□□□ -0
CDKN2CP42773 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.04■□□□□ -0
CDKN2CP42773 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.04■□□□□ -0
CDKN2CP42773 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.04■□□□□ -0
CDKN2CP42773 AC243562.1-201ENST00000560672 389 ntBASIC15.04■□□□□ -0
CDKN2CP42773 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDKN2CP42773 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.04■□□□□ -0
CDKN2CP42773 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.04■□□□□ -0
CDKN2CP42773 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.04■□□□□ -0
CDKN2CP42773 AC027601.4-201ENST00000611259 610 ntBASIC15.04■□□□□ -0
CDKN2CP42773 AC120114.3-201ENST00000611923 658 ntBASIC15.04■□□□□ -0
CDKN2CP42773 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDKN2CP42773 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDKN2CP42773 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDKN2CP42773 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CDKN2CP42773 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDKN2CP42773 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.04■□□□□ -0
CDKN2CP42773 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CDKN2CP42773 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CDKN2CP42773 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.04■□□□□ -0
CDKN2CP42773 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CDKN2CP42773 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDKN2CP42773 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDKN2CP42773 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDKN2CP42773 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDKN2CP42773 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDKN2CP42773 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CDKN2CP42773 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CDKN2CP42773 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CDKN2CP42773 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CDKN2CP42773 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
CDKN2CP42773 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
CDKN2CP42773 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CDKN2CP42773 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CDKN2CP42773 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDKN2CP42773 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDKN2CP42773 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CDKN2CP42773 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.03■□□□□ -0
CDKN2CP42773 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.03■□□□□ -0
CDKN2CP42773 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.03■□□□□ -0
CDKN2CP42773 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDKN2CP42773 AL591424.1-201ENST00000442569 1213 ntBASIC15.03■□□□□ -0
CDKN2CP42773 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
CDKN2CP42773 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.03■□□□□ -0
CDKN2CP42773 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.03■□□□□ -0
CDKN2CP42773 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.03■□□□□ -0
CDKN2CP42773 AL121894.2-201ENST00000602977 491 ntBASIC15.03■□□□□ -0
CDKN2CP42773 FAM197Y3-203ENST00000618346 717 ntBASIC15.03■□□□□ -0
CDKN2CP42773 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.03■□□□□ -0
CDKN2CP42773 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
CDKN2CP42773 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms