Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
USP8P40818 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.41■□□□□ 0.38
USP8P40818 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.41■□□□□ 0.38
USP8P40818 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
USP8P40818 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP8P40818 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.4■□□□□ 0.38
USP8P40818 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
USP8P40818 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USP8P40818 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP8P40818 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP8P40818 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.4■□□□□ 0.38
USP8P40818 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.4■□□□□ 0.38
USP8P40818 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
USP8P40818 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP8P40818 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP8P40818 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.4■□□□□ 0.38
USP8P40818 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP8P40818 AL009178.2-201ENST00000597278 2719 ntBASIC17.4■□□□□ 0.38
USP8P40818 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP8P40818 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP8P40818 AP002414.2-201ENST00000591780 3365 ntBASIC17.4■□□□□ 0.38
USP8P40818 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
USP8P40818 POLL-206ENST00000370172 2308 ntTSL 2 BASIC17.4■□□□□ 0.38
USP8P40818 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP8P40818 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP8P40818 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP8P40818 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP8P40818 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.4■□□□□ 0.38
USP8P40818 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.4■□□□□ 0.38
USP8P40818 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.4■□□□□ 0.38
USP8P40818 CEND1P1-201ENST00000451006 455 ntBASIC17.4■□□□□ 0.38
USP8P40818 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
USP8P40818 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.4■□□□□ 0.38
USP8P40818 AC098859.1-201ENST00000502915 1238 ntBASIC17.4■□□□□ 0.38
USP8P40818 AC079140.1-201ENST00000508039 487 ntBASIC17.4■□□□□ 0.38
USP8P40818 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.4■□□□□ 0.38
USP8P40818 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.4■□□□□ 0.38
USP8P40818 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.4■□□□□ 0.38
USP8P40818 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP8P40818 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
USP8P40818 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.4■□□□□ 0.38
USP8P40818 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USP8P40818 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USP8P40818 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP8P40818 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
USP8P40818 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
USP8P40818 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
USP8P40818 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.4■□□□□ 0.38
USP8P40818 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USP8P40818 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP8P40818 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP8P40818 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.4■□□□□ 0.38
USP8P40818 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP8P40818 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
USP8P40818 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP8P40818 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
USP8P40818 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
USP8P40818 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.39■□□□□ 0.38
USP8P40818 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
USP8P40818 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
USP8P40818 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
USP8P40818 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.39■□□□□ 0.37
USP8P40818 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.39■□□□□ 0.37
USP8P40818 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
USP8P40818 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.39■□□□□ 0.37
USP8P40818 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.39■□□□□ 0.37
USP8P40818 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP8P40818 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.39■□□□□ 0.37
USP8P40818 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
USP8P40818 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.39■□□□□ 0.37
USP8P40818 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
USP8P40818 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP8P40818 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC17.39■□□□□ 0.37
USP8P40818 UXT-AS1-201ENST00000590504 1525 ntBASIC17.39■□□□□ 0.37
USP8P40818 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP8P40818 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.39■□□□□ 0.37
USP8P40818 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.39■□□□□ 0.37
USP8P40818 ADH5P3-201ENST00000433842 1137 ntBASIC17.39■□□□□ 0.37
USP8P40818 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.39■□□□□ 0.37
USP8P40818 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.39■□□□□ 0.37
USP8P40818 MIR4321-201ENST00000592276 80 ntBASIC17.39■□□□□ 0.37
USP8P40818 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.39■□□□□ 0.37
USP8P40818 AC073389.1-201ENST00000595595 795 ntBASIC17.39■□□□□ 0.37
USP8P40818 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP8P40818 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.39■□□□□ 0.37
USP8P40818 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.39■□□□□ 0.37
USP8P40818 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
USP8P40818 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.39■□□□□ 0.37
USP8P40818 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP8P40818 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP8P40818 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.39■□□□□ 0.37
USP8P40818 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP8P40818 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP8P40818 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP8P40818 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP8P40818 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.39■□□□□ 0.37
USP8P40818 AC006058.4-201ENST00000624016 1670 ntBASIC17.39■□□□□ 0.37
USP8P40818 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP8P40818 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.38■□□□□ 0.37
USP8P40818 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms