Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.58□□□□□ -0.24
CDKN1AP38936 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDKN1AP38936 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDKN1AP38936 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.58□□□□□ -0.24
CDKN1AP38936 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.58□□□□□ -0.24
CDKN1AP38936 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CDKN1AP38936 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.58□□□□□ -0.24
CDKN1AP38936 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.58□□□□□ -0.24
CDKN1AP38936 AC234783.1-201ENST00000441761 496 ntBASIC13.58□□□□□ -0.24
CDKN1AP38936 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CDKN1AP38936 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CDKN1AP38936 LINC01115-203ENST00000606068 577 ntBASIC13.58□□□□□ -0.24
CDKN1AP38936 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDKN1AP38936 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.58□□□□□ -0.24
CDKN1AP38936 AL033527.5-201ENST00000641382 801 ntBASIC13.58□□□□□ -0.24
CDKN1AP38936 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CDKN1AP38936 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.58□□□□□ -0.24
CDKN1AP38936 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.58□□□□□ -0.24
CDKN1AP38936 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDKN1AP38936 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDKN1AP38936 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDKN1AP38936 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CDKN1AP38936 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDKN1AP38936 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDKN1AP38936 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.58□□□□□ -0.24
CDKN1AP38936 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDKN1AP38936 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDKN1AP38936 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDKN1AP38936 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
CDKN1AP38936 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDKN1AP38936 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN1AP38936 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN1AP38936 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN1AP38936 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN1AP38936 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN1AP38936 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.57□□□□□ -0.24
CDKN1AP38936 NFIC-211ENST00000641145 8399 ntBASIC13.57□□□□□ -0.24
CDKN1AP38936 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN1AP38936 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CDKN1AP38936 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN1AP38936 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CDKN1AP38936 AGGF1P2-201ENST00000426656 2106 ntBASIC13.57□□□□□ -0.24
CDKN1AP38936 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN1AP38936 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN1AP38936 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.57□□□□□ -0.24
CDKN1AP38936 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CDKN1AP38936 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN1AP38936 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN1AP38936 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN1AP38936 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.57□□□□□ -0.24
CDKN1AP38936 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CDKN1AP38936 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.57□□□□□ -0.24
CDKN1AP38936 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN1AP38936 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.57□□□□□ -0.24
CDKN1AP38936 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.57□□□□□ -0.24
CDKN1AP38936 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.57□□□□□ -0.24
CDKN1AP38936 RARRES2P5-201ENST00000564013 466 ntBASIC13.57□□□□□ -0.24
CDKN1AP38936 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.57□□□□□ -0.24
CDKN1AP38936 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.57□□□□□ -0.24
CDKN1AP38936 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CDKN1AP38936 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN1AP38936 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN1AP38936 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.57□□□□□ -0.24
CDKN1AP38936 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.57□□□□□ -0.24
CDKN1AP38936 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.57□□□□□ -0.24
CDKN1AP38936 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN1AP38936 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN1AP38936 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN1AP38936 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.57□□□□□ -0.24
CDKN1AP38936 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.57□□□□□ -0.24
CDKN1AP38936 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CDKN1AP38936 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN1AP38936 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN1AP38936 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN1AP38936 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN1AP38936 AC106886.4-201ENST00000623557 2502 ntBASIC13.57□□□□□ -0.24
CDKN1AP38936 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN1AP38936 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
CDKN1AP38936 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN1AP38936 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.57□□□□□ -0.24
CDKN1AP38936 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CDKN1AP38936 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CDKN1AP38936 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CDKN1AP38936 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN1AP38936 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN1AP38936 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.57□□□□□ -0.24
CDKN1AP38936 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN1AP38936 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN1AP38936 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.56□□□□□ -0.24
CDKN1AP38936 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN1AP38936 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN1AP38936 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN1AP38936 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN1AP38936 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN1AP38936 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
CDKN1AP38936 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN1AP38936 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.56□□□□□ -0.24
CDKN1AP38936 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.56□□□□□ -0.24
CDKN1AP38936 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
CDKN1AP38936 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms