Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HMGCLP35914 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HMGCLP35914 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.77■□□□□ 0.12
HMGCLP35914 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HMGCLP35914 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.77■□□□□ 0.12
HMGCLP35914 AC105250.1-201ENST00000509378 2057 ntBASIC15.77■□□□□ 0.12
HMGCLP35914 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HMGCLP35914 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HMGCLP35914 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
HMGCLP35914 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.77■□□□□ 0.12
HMGCLP35914 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HMGCLP35914 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.77■□□□□ 0.12
HMGCLP35914 AC092850.2-201ENST00000623821 2697 ntBASIC15.77■□□□□ 0.12
HMGCLP35914 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.77■□□□□ 0.12
HMGCLP35914 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HMGCLP35914 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HMGCLP35914 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
HMGCLP35914 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.77■□□□□ 0.12
HMGCLP35914 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
HMGCLP35914 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
HMGCLP35914 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.77■□□□□ 0.12
HMGCLP35914 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HMGCLP35914 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HMGCLP35914 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.77■□□□□ 0.12
HMGCLP35914 MRPS18AP1-201ENST00000414458 589 ntBASIC15.77■□□□□ 0.12
HMGCLP35914 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.12
HMGCLP35914 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.77■□□□□ 0.12
HMGCLP35914 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.77■□□□□ 0.12
HMGCLP35914 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.77■□□□□ 0.12
HMGCLP35914 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
HMGCLP35914 SLED1-202ENST00000512051 380 ntBASIC15.77■□□□□ 0.12
HMGCLP35914 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.77■□□□□ 0.12
HMGCLP35914 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
HMGCLP35914 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.77■□□□□ 0.12
HMGCLP35914 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HMGCLP35914 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HMGCLP35914 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
HMGCLP35914 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HMGCLP35914 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HMGCLP35914 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
HMGCLP35914 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
HMGCLP35914 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HMGCLP35914 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
HMGCLP35914 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HMGCLP35914 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HMGCLP35914 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.77■□□□□ 0.11
HMGCLP35914 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.76■□□□□ 0.11
HMGCLP35914 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCLP35914 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCLP35914 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCLP35914 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCLP35914 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCLP35914 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
HMGCLP35914 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCLP35914 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCLP35914 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCLP35914 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCLP35914 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCLP35914 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.76■□□□□ 0.11
HMGCLP35914 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCLP35914 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCLP35914 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.76■□□□□ 0.11
HMGCLP35914 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCLP35914 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCLP35914 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCLP35914 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCLP35914 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.76■□□□□ 0.11
HMGCLP35914 AC015922.1-201ENST00000421102 1152 ntBASIC15.76■□□□□ 0.11
HMGCLP35914 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.76■□□□□ 0.11
HMGCLP35914 INGX-202ENST00000489074 768 ntBASIC15.76■□□□□ 0.11
HMGCLP35914 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.76■□□□□ 0.11
HMGCLP35914 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.76■□□□□ 0.11
HMGCLP35914 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.76■□□□□ 0.11
HMGCLP35914 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
HMGCLP35914 AC092337.1-201ENST00000568699 1129 ntBASIC15.76■□□□□ 0.11
HMGCLP35914 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
HMGCLP35914 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCLP35914 AC008738.7-201ENST00000609744 511 ntBASIC15.76■□□□□ 0.11
HMGCLP35914 AC004461.2-201ENST00000629517 803 ntBASIC15.76■□□□□ 0.11
HMGCLP35914 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.76■□□□□ 0.11
HMGCLP35914 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.76■□□□□ 0.11
HMGCLP35914 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCLP35914 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCLP35914 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
HMGCLP35914 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCLP35914 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCLP35914 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCLP35914 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCLP35914 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
HMGCLP35914 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.76■□□□□ 0.11
HMGCLP35914 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCLP35914 AC020658.6-201ENST00000623564 1870 ntBASIC15.76■□□□□ 0.11
HMGCLP35914 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCLP35914 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCLP35914 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.76■□□□□ 0.11
HMGCLP35914 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCLP35914 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCLP35914 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
HMGCLP35914 AC127383.1-201ENST00000444697 1800 ntBASIC15.75■□□□□ 0.11
HMGCLP35914 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms