Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HOXC8P31273 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC8P31273 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC8P31273 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC8P31273 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HOXC8P31273 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC8P31273 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.05■□□□□ 0.32
HOXC8P31273 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.05■□□□□ 0.32
HOXC8P31273 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXC8P31273 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.05■□□□□ 0.32
HOXC8P31273 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXC8P31273 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC8P31273 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC8P31273 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC8P31273 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXC8P31273 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC8P31273 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC8P31273 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC8P31273 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
HOXC8P31273 AL645937.2-201ENST00000396808 931 ntBASIC17.05■□□□□ 0.32
HOXC8P31273 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC8P31273 AL591846.1-201ENST00000451736 433 ntBASIC17.05■□□□□ 0.32
HOXC8P31273 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.05■□□□□ 0.32
HOXC8P31273 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HOXC8P31273 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC8P31273 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HOXC8P31273 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXC8P31273 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.05■□□□□ 0.32
HOXC8P31273 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.05■□□□□ 0.32
HOXC8P31273 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.05■□□□□ 0.32
HOXC8P31273 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.05■□□□□ 0.32
HOXC8P31273 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC8P31273 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC8P31273 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
HOXC8P31273 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC8P31273 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC8P31273 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXC8P31273 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC8P31273 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXC8P31273 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HOXC8P31273 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXC8P31273 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXC8P31273 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC8P31273 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXC8P31273 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC8P31273 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC8P31273 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HOXC8P31273 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC8P31273 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC8P31273 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC8P31273 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HOXC8P31273 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC8P31273 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC8P31273 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.04■□□□□ 0.32
HOXC8P31273 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HOXC8P31273 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC8P31273 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC8P31273 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
HOXC8P31273 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.04■□□□□ 0.32
HOXC8P31273 AL139094.1-201ENST00000405549 1188 ntBASIC17.04■□□□□ 0.32
HOXC8P31273 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
HOXC8P31273 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.04■□□□□ 0.32
HOXC8P31273 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXC8P31273 Z93015.1-201ENST00000451718 390 ntBASIC17.04■□□□□ 0.32
HOXC8P31273 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.04■□□□□ 0.32
HOXC8P31273 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC8P31273 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXC8P31273 AC091271.1-201ENST00000611877 1162 ntBASIC17.04■□□□□ 0.32
HOXC8P31273 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.04■□□□□ 0.32
HOXC8P31273 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.04■□□□□ 0.32
HOXC8P31273 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC8P31273 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXC8P31273 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.04■□□□□ 0.32
HOXC8P31273 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXC8P31273 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXC8P31273 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC8P31273 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC8P31273 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.04■□□□□ 0.32
HOXC8P31273 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
HOXC8P31273 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC8P31273 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.04■□□□□ 0.32
HOXC8P31273 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC8P31273 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HOXC8P31273 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC8P31273 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC8P31273 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC8P31273 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXC8P31273 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.03■□□□□ 0.32
HOXC8P31273 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
HOXC8P31273 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXC8P31273 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC8P31273 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC8P31273 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC8P31273 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC8P31273 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC8P31273 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC8P31273 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXC8P31273 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC8P31273 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC8P31273 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms