Protein–RNA interactions for Protein: P23229

ITGA6, Integrin alpha-6, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6P23229 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ITGA6P23229 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
ITGA6P23229 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ITGA6P23229 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ITGA6P23229 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ITGA6P23229 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ITGA6P23229 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ITGA6P23229 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ITGA6P23229 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC19.41■□□□□ 0.7
ITGA6P23229 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ITGA6P23229 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ITGA6P23229 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ITGA6P23229 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ITGA6P23229 AC112504.1-201ENST00000623415 1841 ntBASIC19.4■□□□□ 0.7
ITGA6P23229 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ITGA6P23229 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
ITGA6P23229 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
ITGA6P23229 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ITGA6P23229 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ITGA6P23229 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ITGA6P23229 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ITGA6P23229 BCRP2-202ENST00000447763 634 ntBASIC19.4■□□□□ 0.7
ITGA6P23229 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ITGA6P23229 BCRP6-201ENST00000510112 632 ntBASIC19.4■□□□□ 0.7
ITGA6P23229 BCRP7-201ENST00000511549 544 ntBASIC19.4■□□□□ 0.7
ITGA6P23229 AP001889.1-201ENST00000525414 633 ntBASIC19.4■□□□□ 0.7
ITGA6P23229 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ITGA6P23229 AP005482.1-201ENST00000563722 1273 ntBASIC19.4■□□□□ 0.7
ITGA6P23229 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ITGA6P23229 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC19.4■□□□□ 0.7
ITGA6P23229 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC19.4■□□□□ 0.7
ITGA6P23229 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ITGA6P23229 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
ITGA6P23229 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ITGA6P23229 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19.4■□□□□ 0.7
ITGA6P23229 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ITGA6P23229 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.4■□□□□ 0.7
ITGA6P23229 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
ITGA6P23229 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ITGA6P23229 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.4■□□□□ 0.7
ITGA6P23229 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
ITGA6P23229 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ITGA6P23229 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
ITGA6P23229 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.39■□□□□ 0.69
ITGA6P23229 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ITGA6P23229 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ITGA6P23229 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ITGA6P23229 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ITGA6P23229 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
ITGA6P23229 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ITGA6P23229 RPL28-203ENST00000428193 573 ntTSL 2 BASIC19.39■□□□□ 0.69
ITGA6P23229 RPL28-204ENST00000431533 590 ntTSL 2 BASIC19.39■□□□□ 0.69
ITGA6P23229 KRT223P-202ENST00000449164 1292 ntBASIC19.39■□□□□ 0.69
ITGA6P23229 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC19.39■□□□□ 0.69
ITGA6P23229 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC19.39■□□□□ 0.69
ITGA6P23229 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
ITGA6P23229 RPL28-207ENST00000558815 616 ntTSL 2 BASIC19.39■□□□□ 0.69
ITGA6P23229 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC19.39■□□□□ 0.69
ITGA6P23229 AL022328.1-201ENST00000610050 478 ntBASIC19.39■□□□□ 0.69
ITGA6P23229 AC133552.6-201ENST00000613406 534 ntBASIC19.39■□□□□ 0.69
ITGA6P23229 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ITGA6P23229 LINC02199-201ENST00000506655 2702 ntBASIC19.39■□□□□ 0.69
ITGA6P23229 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ITGA6P23229 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.39■□□□□ 0.69
ITGA6P23229 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ITGA6P23229 PDIA3P1-201ENST00000471856 1510 ntBASIC19.39■□□□□ 0.69
ITGA6P23229 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC19.39■□□□□ 0.69
ITGA6P23229 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ITGA6P23229 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ITGA6P23229 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ITGA6P23229 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
ITGA6P23229 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
ITGA6P23229 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ITGA6P23229 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ITGA6P23229 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ITGA6P23229 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ITGA6P23229 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ITGA6P23229 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ITGA6P23229 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ITGA6P23229 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ITGA6P23229 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ITGA6P23229 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ITGA6P23229 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ITGA6P23229 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ITGA6P23229 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC19.38■□□□□ 0.69
ITGA6P23229 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ITGA6P23229 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
ITGA6P23229 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ITGA6P23229 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ITGA6P23229 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ITGA6P23229 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ITGA6P23229 AC005229.1-201ENST00000392885 409 ntBASIC19.38■□□□□ 0.69
ITGA6P23229 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ITGA6P23229 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ITGA6P23229 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ITGA6P23229 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.38■□□□□ 0.69
ITGA6P23229 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ITGA6P23229 AC104989.1-201ENST00000519711 778 ntBASIC19.38■□□□□ 0.69
ITGA6P23229 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC19.38■□□□□ 0.69
ITGA6P23229 AL603832.2-201ENST00000566195 2125 ntBASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms